Gene Sputcn32_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1703 
Symbol 
ID5079361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1941317 
End bp1942414 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content44% 
IMG OID640498852 
ProductNlpB/DapX family lipoprotein 
Protein accessionYP_001183227 
Protein GI146292803 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.63681e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA AAGTCACCCC ACTGATCTTA GTCGCTGCCG TTGCGGCCTG TTCCTCACCA 
CTTGAACGTC GTCAAGCAAA CGGTGGCGAT GACTATGTTC AGGCTGAGCA AGCGCCAATG
CTTAAAATCC CAGAGGGATT AAAGACGCCA CCTTACAATA AAGAATATGA AGTGCCAGCG
TTAGGCGCTA AAGCGAATAC TGCGCTTATT GGTAAAACCC TTGATATTCG TCCACCATTG
CAAGTACTGC CAATGGCTGA AGGTACCCAT GTTGAAGAGG GTAGCGATAA TATCAAAATC
GTGGTTGAGT CTATCGACAA TTCAGCAGAC CTAAAGCAAG AGATCTTTGC TAACTTAGAT
GGTTTCTTAG CAAAGCAAGC GATCCCTGTT CGTAGCCGTG ATTTTGATAA GAGCAATATC
GAAACCGACT GGATCGAAAG CCGTGAAGTG ATTGAATCGA GCCTGTGGGG GGCGGATAAA
GTCTATCTGT TACGCCAACG CTATCGTTTC GATGTGGAAA CCCGTCCACA TGGCCGTACG
GCAAGTATCG TTATTCACTT AGTTGAACAT GAAGAGTTTT ACGACGATAA AGCCCAAGAA
GTGTTATTAA GTGGTGAAGA TAAACAAAGA TACACCATTG ATATGCTTAA CAGCGCTATC
GCTTATATGA GCGTTAAACG TGAGCAAGCA ATCCAAGCCA ATCGCTTAAA GCAAACATTA
GGGATCAATG TTGATCTCGT GACACCAGAG GCGGGAGCCG CCTATTGGTC AGCTAAAGCA
CCTTATAAGC AAGTGTGGGA TCGTTTGCGT ATCGTACTCC CTGAAATGGG GTTTGAAATT
GCCGATATGG ATAGTACGAA AGGATTGTAC TTCATCAAGT TTACGGATAA TTCGGGTTTC
TGGAGTTCGC TCTGGAGCAG TAACAAGGTA TCGCTAAAAG AGGGCAGTTA TCGTTTACTG
CTGGAAGATG GTGATACACC TGAAGAGACC AAATTATTCC TACGTGATGG TGATGACCAA
CCATTAGCGA ATGATGTTGT GTCTAATATC AACCAATCAT TGACAGATTT GATGAGAGAA
GAACGTAAGC TACGCTAA
 
Protein sequence
MLKKVTPLIL VAAVAACSSP LERRQANGGD DYVQAEQAPM LKIPEGLKTP PYNKEYEVPA 
LGAKANTALI GKTLDIRPPL QVLPMAEGTH VEEGSDNIKI VVESIDNSAD LKQEIFANLD
GFLAKQAIPV RSRDFDKSNI ETDWIESREV IESSLWGADK VYLLRQRYRF DVETRPHGRT
ASIVIHLVEH EEFYDDKAQE VLLSGEDKQR YTIDMLNSAI AYMSVKREQA IQANRLKQTL
GINVDLVTPE AGAAYWSAKA PYKQVWDRLR IVLPEMGFEI ADMDSTKGLY FIKFTDNSGF
WSSLWSSNKV SLKEGSYRLL LEDGDTPEET KLFLRDGDDQ PLANDVVSNI NQSLTDLMRE
ERKLR