Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1677 |
Symbol | |
ID | 5079335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1912194 |
End bp | 1912655 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498826 |
Product | hypothetical protein |
Protein accession | YP_001183201 |
Protein GI | 146292777 |
COG category | [S] Function unknown |
COG ID | [COG2947] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTACT GGCTTATGAA ATCAGAACCC GATGAATTTA GCATAGATGA TCTCAAGGCT TGTCCGAACC AAACTGAAGC TTGGTATGGG ATACGCAACT ATCAGGCACG TAATTTTATG CGCGATGGGA TGCAGATTGG CGACAAGGTA TTTTTTTACC ACTCAAGCTG CAAAGTACCT GGTATTGTCG GTATCGCTGA AGTCGTGACC CATGCTTATC CAGATAGCAC GGCCTTCGAT CTAGAATCGA CATATTTCGA CCCTAAATCA GATCCCTCCA AACCAAGATG GCTTAGCATC GACATCCGCT TTGTCGAAAA ATTTGACCAT ATAATCCCTT TAAGTCGCAT TAAAAACATG CCGCAACTAA CAGATATGTA TCTTGTATCT AAAGGTTCCA GACTGAGTAT TCAGCCGGTA ACCGCCGAAC AATGGCAAAC TGTGCTAATG TTAACCCGCT GA
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Protein sequence | MNYWLMKSEP DEFSIDDLKA CPNQTEAWYG IRNYQARNFM RDGMQIGDKV FFYHSSCKVP GIVGIAEVVT HAYPDSTAFD LESTYFDPKS DPSKPRWLSI DIRFVEKFDH IIPLSRIKNM PQLTDMYLVS KGSRLSIQPV TAEQWQTVLM LTR
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