Gene Sputcn32_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1660 
Symbol 
ID5079408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1891411 
End bp1893600 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content46% 
IMG OID640498809 
ProductTonB-dependent receptor 
Protein accessionYP_001183184 
Protein GI146292760 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.50921e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACA GTAAAAATCA CATTTCTAGC ACATCCTTGA AGCGAGCACC GTTGGCATTA 
GCCATTGCCG CCGCGCTCAG CACCTCTGCA TTTGCACAAA CCGATGCTAT CGATAAACCC
GATCCGAACA CTGAGATGGA AATCATGGTG GTGACGGCGG ATTTTCGCAG TGCCAGTTTA
GAAAAAATGC CTTCAAGCAT AACCGTTATC GATGCCCAGC AAATTCAAGA TGAAAGCGCA
CAGCACTTTG AAGATGTGCT TAATTCCATC GCTAACGTTA ATTGGTCAGG TGGCAGCTCG
CGGCCGAAAT ATTTTCAGAT CCGCGGCGTG GGTGAGCAAG AGCAATATCA AGGCGCACCT
AACTCATCGG TAGGCTATAT TGTTGATGAT ATTGACTTAT CTGGTATCGG CATGGTGTCG
AGTATGTATG ATCTACAACA AGTCGAAGTG CTGCGTGGGC CACAGGGGAC ACGCTACGGC
GCCAATGCCT TAGCGGGATT AATTTACTTA AAAAGTAATG ATCCAACCGA TGTGTTTGAG
CATGGTGCAG AGGTGTCTTT AGGCAATGAC GATCTGCAAA CCTTTAGCGG TTTTAGCTCT
GGACCATTAA CGGATTCTGG TAAGTTGCTG TACCGTGTGG CGCTACAGCA ACATCAGCAA
AACGGTTATC GCGATAATCT GTATTTAGGA CGTGATGACA CCAATGGCCG TGATGAATTT
ACGGGTCGCG CTAAATTACG CTGGTATGCA ACCGATGATT TGCAACTGGA TTTAACCCTG
CTACATGCCA ATTTTGATAA TGGTTATGAT GTGTGGAGTT TAACCAATTC ACCAACACAG
ACGACCTCGG ATCAGCCTGG CGTTGATAGC CAGCGCACCA CTGGTGTGGG TTTTAAAGCG
ACTTACTCAG GTGCAGAGCA GTTTGAGCTG ACATCACTTA CCTCATTTGC CAATACCGAT
CATCATTATA GTTACGATGG CGATTGGGCC AATTCTGAGT ATTGGGCATC TAAACAATGT
GAAGAGGGCG GTAATGTATC CCCTTGTCAG TACGATTACT TTTGGGACAA AACGGGTCAG
CGTAAAACTT TATCCCAAGA GTTTCGTTTA AGCTCGACGG ATCAAGGCCG TATTTTTGCA
GGCTCAACCG ATTGGTTAAT TGGGGTCTAT GGGATGAACC TCAAAGAAGA TAACCAATTG
GATTCTGAAT ATAATTCTTG GCCGGATGAG GTATTAGACT CAGAGTACGA AGCGACGAAC
TATGCGCTGT TTGGTCAGAT CGATACGGAT CTGGGCTCTG ATTATACCTT ATCTGTGGGG
CTACGTTTGG AGCGGCGTAA TAGCCATTAC TCGGATACTA ATAACGACAA TTTCGATCCG
AGTGAAACCA TGTGGGGCGG CCATATTGCA CTCAGTAAAG TGCTGAGTGA GTCTCATAAT
GTTTACGCCC GTGTGGCGCG GGGTTACAAG GCGGGCGGGT TTAATATGAC CTTACCAGTC
GAACTCAATG ATAAAAAAGA GTTTGATCCC GAAACCTTAT ACAACTACGA AATCGGTTTA
AAATCCCATT GGTTTGAAGG GATTATCGAC ACCAATTTTG CGCTGTTCTA TATGGATAGA
CAGGATCAGC AAGTGGCAGC TTCGCAGCAA GATCCCAACA AGCCACAACG GTTTATCCTC
TACACTGAAA ATGCGGGTAG CTCAAACAAC TACGGTGCCG AGCTGGACGT GACTTGGTAC
GCCACCGATA ATCTCCAGTT TTATTCAAGC CTTGGTTGGT TAGAGACCGC TTACGGTAAT
TACCAATATC AAGATAAGTA CGGTACTGAT GTGGATTTAA CTGACCGCGA TCTAGCCCAT
TCCCCCCACT TTACCTACAG CCTTGGCGGG ACTTATCGTG CTAACTCAGG TTGGTTTGCC
AACTTGAATA TGAGTGGCAA GAGCGAGTTT TATTACTCAG ACAGTAATGA CTCCCGCTCT
GAACCATATA CTGTTGTGAA TGCGCGGCTT GGTTATGAGG CGAGTGCTTG GTCGGCTTAT
TTATGGGGCC GTAATTTATT TGATGAAGAA TATGGCGTTC GTGGTTTCTA TTTTGGTAAC
GAGCCCGATA ATGGCTGGGC AGAAAAACAA TATATTCGCT ATGGCGATCC GCGCCAGATT
GGTGTGACCT TTAACGTCAA GTTTATGTAG
 
Protein sequence
MFNSKNHISS TSLKRAPLAL AIAAALSTSA FAQTDAIDKP DPNTEMEIMV VTADFRSASL 
EKMPSSITVI DAQQIQDESA QHFEDVLNSI ANVNWSGGSS RPKYFQIRGV GEQEQYQGAP
NSSVGYIVDD IDLSGIGMVS SMYDLQQVEV LRGPQGTRYG ANALAGLIYL KSNDPTDVFE
HGAEVSLGND DLQTFSGFSS GPLTDSGKLL YRVALQQHQQ NGYRDNLYLG RDDTNGRDEF
TGRAKLRWYA TDDLQLDLTL LHANFDNGYD VWSLTNSPTQ TTSDQPGVDS QRTTGVGFKA
TYSGAEQFEL TSLTSFANTD HHYSYDGDWA NSEYWASKQC EEGGNVSPCQ YDYFWDKTGQ
RKTLSQEFRL SSTDQGRIFA GSTDWLIGVY GMNLKEDNQL DSEYNSWPDE VLDSEYEATN
YALFGQIDTD LGSDYTLSVG LRLERRNSHY SDTNNDNFDP SETMWGGHIA LSKVLSESHN
VYARVARGYK AGGFNMTLPV ELNDKKEFDP ETLYNYEIGL KSHWFEGIID TNFALFYMDR
QDQQVAASQQ DPNKPQRFIL YTENAGSSNN YGAELDVTWY ATDNLQFYSS LGWLETAYGN
YQYQDKYGTD VDLTDRDLAH SPHFTYSLGG TYRANSGWFA NLNMSGKSEF YYSDSNDSRS
EPYTVVNARL GYEASAWSAY LWGRNLFDEE YGVRGFYFGN EPDNGWAEKQ YIRYGDPRQI
GVTFNVKFM