Gene Sputcn32_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1649 
Symbol 
ID5079397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1881429 
End bp1882067 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID640498798 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001183173 
Protein GI146292749 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATC TCAGTGATAT CCGCCGCGAG TATGCTAAAG GCGGCTTAAG ACGTGCCGAC 
TTACCGCAAA ACCCGATGGA CTTGTTTGCA CTGTGGATGA CACAGGCGAG GGATGCTGAG 
CTTAGCGATC CCACTGCAAT GTGTGTGGCA ACTGTGGATG AACAAGGTCA ACCTTTTCAA 
CGGATTGTGT TACTTAAGCG TTTTGATGAC ACAGGTTTTG TGTTTTTCAC TAACTTAGGC 
AGCCGCAAGG CACAGCAGAT CGCAGCCAAT AATAAAGTCA GTTTACATTT CCCTTGGCAT 
CCTTTGGAGC GCCAAGTCTC GGTGCTTGGC GAAGCTCAGG CCCTTTCTAC TACTGAAGTA 
CTTAAATACT TTATGACTCG GCCTAAAGAC AGCCAAATTG CCGCATGGGT ATCGCAGCAA 
TCGAGTAAAC TCAGTGCCAG ACAAGTGCTT GAGGGCAAAT TTTTCGAAAT GAAGGCTAAG 
TTCGCTAAGG GGGATGTGCC CTTGCCTAGT TTTTGGGGGG GATATCTTGT CAGACCCAAG 
AGTATCGAAT TTTGGCAGGG AGGAGAGCAC AGATTGCATG ATCGTTTTAT TTATACTCTC 
GATAATACTC AGTGGATTAT CGATCGTTTA GCCCCATAA
 
Protein sequence
MTDLSDIRRE YAKGGLRRAD LPQNPMDLFA LWMTQARDAE LSDPTAMCVA TVDEQGQPFQ 
RIVLLKRFDD TGFVFFTNLG SRKAQQIAAN NKVSLHFPWH PLERQVSVLG EAQALSTTEV 
LKYFMTRPKD SQIAAWVSQQ SSKLSARQVL EGKFFEMKAK FAKGDVPLPS FWGGYLVRPK 
SIEFWQGGEH RLHDRFIYTL DNTQWIIDRL AP