Gene Sputcn32_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1644 
Symbol 
ID5079392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1875421 
End bp1876086 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID640498793 
Producthypothetical protein 
Protein accessionYP_001183168 
Protein GI146292744 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.808623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA CGTTACACGA AGCCAGAGTC ATCGGATGCC TGCTGGAAAA AGAAATCACC 
ACTCCCGAGC AATATCCACT CTCGCTAAAC GCATTGACCT TAGCCTGTAA TCAAAAAACC 
AGCCGTGAAC CCGTGTTGGA CTTAAGCGAA GCTCAAGTGC AAGATGCCCT TGACTCCCTA 
ACTAAAAAGC GTCTCATCAG CGAGCAATCG GGATTTGGCA GTCGCGTAGT CAAATATAAA 
CATCGATTCT GCAACACCGA ATTTAGCGAA TTACAATTGT CACCCGCCGC GGTTGCCATC 
GTCTGTTTAT TGTTGCTACG TGGTCCACAA ACACCGGGGG AATTACGCAC CAGAAGCAAC 
AGACTCCACG AATTTAAGGA TGTGATCGAA GTTGAAGATT GCATTAAGCA ACTAATCAGC 
CGCACTAAAC CAATCTTAAA GCAACTACCA AGGGAACCTG GGCGACGCGA AAGTCGCTAT 
GTGGAATTGT TTTCTGAGAC GTCAGCTAAT GTGGTAACAA CCAGTGATCA CACAGATAAA 
CCCCATATTC CTCCTGTCGC AGCATTAGTC GAACATGGAG CATTGGTTGC AAGAGTCACT 
GAGCTAGAAC AGCATGTAGC CACACTTACA CAAAAATTCG ATGAGCTCAT TGCATCGTTA 
ACCTAG
 
Protein sequence
MELTLHEARV IGCLLEKEIT TPEQYPLSLN ALTLACNQKT SREPVLDLSE AQVQDALDSL 
TKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSPAAVAI VCLLLLRGPQ TPGELRTRSN 
RLHEFKDVIE VEDCIKQLIS RTKPILKQLP REPGRRESRY VELFSETSAN VVTTSDHTDK 
PHIPPVAALV EHGALVARVT ELEQHVATLT QKFDELIASL T