Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1640 |
Symbol | uvrC |
ID | 5079384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1869851 |
End bp | 1871680 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498785 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001183164 |
Protein GI | 146292740 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00105988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTG TTTTTAACGC CCAAAGTTTT TTACGCACGG TTTCATCTTC TGCCGGGGTT TATCGCATGT ATGACGTCAA GGGTGACGTC ATCTATGTGG GAAAAGCCAA GGATCTTAAA AAACGGCTTT CGTCGTATTT TCGTAAAAAT TTAGACAATG TTAAGACTCA AGCCTTAGTC TCGCATATTC ACCATATTGA TGTGACACTG ACCCACAGTG AAACCGATGC CTTGTTGCTT GAAAATGATT ACATCAAGCA ATACATGCCT AAATACAATG TGTTGTTGCG TGATGATAAA TCTTATCCTT ACATTTTATT AAGCCAACAC GAACACCCAA GGCTTGCCTA TCACCGTGGC CCCCAGCGTG AAAAAGGCCA TTATTTTGGC CCTTACCCCA ATGGCGGCGC GGTACGTGAA AGCCTGCATT TAATGCAGAA ACTCTTTCCT ATTCGTCAAT GTGACGACCT TTATTACAAA TCCCGTTCAC GGCCCTGTTT GCAGTATCAG CTTTCCCGCT GCAGTGCGCC TTGCGTGGGA AAAGTCAGCA ATGCCGACTA CGACGAACAA GTGAAACTTG CTAGCTTATT TTTAAAAGGC AAAGATCAGC AAGTGATCAG TACGTTAGTA GCTAAGATGG AGCAGGCGGC GCAGCAGCAG GAATATGAAC AGGCGGCACG CTTTCGTGAT CAAATTATGG CGCTGCGTAA GGTCGCTGAG CAGCAGGAAG TATCGAACAA TAAAGGCGAT ATGGATGTGA TTGGTGTGCA CTATGCGTCG GGTATCGCCT GTTTCCATTT GTTATTTATC CGCGAGGGTA AAATCTTTGG TAGTCGCAGT TATTATCCTT CTGTACCGGC CCAGACGGAT ATGGATGAAG TGCTGCGATC CTTTATTCTG CAGTTTTACT TAAATGCCGA TATACAGCGC ACTATTCCAA AGGAAGTGGT CATCAGCCAC AACTTTGAAG AGTTGCACGA GCTGGAAGCC GCGGTATCCA TTGCACTGAA TAAAAAGTTT TCGATAAAGA CCAATGTGCG TGCCGATAGG GCCAGTTTTT TACGCTTGGC TGTGACCAAT GCCACCAATG CTGTCATCAC GCGTTTATCC CATAAGAACA CGGTCGAGCA GCGTTTTGTA TTATTAGAAG AAATTTTAGA ATTGAGTACA CCTATACACC GTATGGAATG TTTTGATATC AGCCATACTA TGGGAGAAAG TTCCGTTGCC TCCTGTGTGG TATTTAACCG TGAAGGGCCA CATAAAGGAG AATATCGTCG CTATAATATC GAAGGCATTA CGCCTGGTGA TGATTATGCT GCGATGAAAC AAGCCATCAC TCGCCGTTTT GATAAGATTG AAGCAGGCGG TAAAATCCCT GATATTCTGT TTATCGATGG TGGCTTAGGG CAATTACGCA TTGCTCAGAA AATTGTAGAT GAAAAATTTG TCCATCTCGA TAAAGCGCCG CAATTGATTG GAGTGGCTAA AGGGGAGGGG CGTAAGCCGG GGCTAGAAAC ATTAATTTTA GGGGATACAG AAACGAGTTT TTCCCTTGAA GGTGATTCAC CTGCATTACA TCTGATTCAG CATATTCGTG ATGAATCCCA TCGATTTGCG ATTACAGGAC ATCGCAATCG TCGTCAGAAA ACGCGCAATA CCTCGACGTT GGAATCTATT CCTGGTATTG GTCCTAAACG TCGTAAAGCA CTCTTACAGC ATCTTGGTGG GTTACAGGAG GTGAAGGGGG CGAGTGTAGC CGAATTAGTT AAAGTGCCTG GGATCAGTAT AGAAATGGCA CAAACCATTC ATGATGCATT GCGAGGGTGA
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Protein sequence | MSSVFNAQSF LRTVSSSAGV YRMYDVKGDV IYVGKAKDLK KRLSSYFRKN LDNVKTQALV SHIHHIDVTL THSETDALLL ENDYIKQYMP KYNVLLRDDK SYPYILLSQH EHPRLAYHRG PQREKGHYFG PYPNGGAVRE SLHLMQKLFP IRQCDDLYYK SRSRPCLQYQ LSRCSAPCVG KVSNADYDEQ VKLASLFLKG KDQQVISTLV AKMEQAAQQQ EYEQAARFRD QIMALRKVAE QQEVSNNKGD MDVIGVHYAS GIACFHLLFI REGKIFGSRS YYPSVPAQTD MDEVLRSFIL QFYLNADIQR TIPKEVVISH NFEELHELEA AVSIALNKKF SIKTNVRADR ASFLRLAVTN ATNAVITRLS HKNTVEQRFV LLEEILELST PIHRMECFDI SHTMGESSVA SCVVFNREGP HKGEYRRYNI EGITPGDDYA AMKQAITRRF DKIEAGGKIP DILFIDGGLG QLRIAQKIVD EKFVHLDKAP QLIGVAKGEG RKPGLETLIL GDTETSFSLE GDSPALHLIQ HIRDESHRFA ITGHRNRRQK TRNTSTLESI PGIGPKRRKA LLQHLGGLQE VKGASVAELV KVPGISIEMA QTIHDALRG
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