| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1638 |
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| Symbol | |
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| ID | 5079380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1866233 |
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| End bp | 1867966 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498781 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_001183162 |
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| Protein GI | 146292738 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00274053 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAC TCTTGATATC GACTTCTTCA CTCGCACCTG AATTTAGCCT ACCCTCCCTA
TCTCAGTCGG CTGCCAATTT AAGCGCCTTA CTCTTAGGGC AAGAGCGTGC TGTAGATGCG
TTTAAACTGC ACAATGCCAT AGCAGAACAA CAACTCTATC TTGCCGATTT TCCCGGTATT
GATCGCCATT TAATGATACG TGCGCTGATG GATACCTTGA CTCCTATATC CACGGCTTAT
CTTGTTGCAA CTCGGCCTGT AGATGAAGCG ATACAATTTC AATGGCAACA CAAGCAACCA
TTAGACAACC AAGGTTGCAT TGCAGAAAAG AATGTCCTTT ATCGTTATTT AAGCGGTAAT
ATTCGACGAG TCGATTTACT CGGAAGAATG GTGCAATCGG GTAATAGCAG TAAATACCAA
GCAGGTGCGC TCGCACAATG TCATTATCTG TTTATTTGTG CAGAATCATT GTGGAAACGT
GAGAACTTGT GGGATTTAGT CATGCAAATC CTCACACAAA AAGAGTATCA AATTAGCAGT
ACCTTAAGCC CAGTACCATT AAATTGTAAA ATAGTGCTAG TGGGCGCAGG GATGATTTAT
AGTCAAGTGC GCTCTGAGGA TTGGCAATTT CAGCGTCATT TTACCCTCTT AGCAGAACTC
GCCAGTGAAA TAGACCTAAT GCGCTATAAA GAATCACAAT ACGCAGCATG GTTACAAACT
GTAGCGCAAA GTGTCGATGT AACATTAGAA CAGTCAAGTC TGGCGCCACT ATTTCGTTAC
AGCGCACGCT TAACAGAACA TCAACGTCGT CTAAGTTTAT CTATGCTCGA TTTTGCTCAG
TTGATGGCAC AAGCTAAAGC CTACCGTGGC AAACCTAGCA TCAATGCTAG CGACATTGAA
TATGCCCTGT CCCAAGCTAA TTATCGTCAT AACAGCTCCG AAGAATTTTC AGGTCAGAGT
TTTGATGACA ATTTCATAAA TCTGCCAACA ACAGGGGCTA TGGTAGGACA GATAAACGGC
CTAACCGTGA TTGATGCGAT TGATTATAGT TATGGTGAAC CCGCACGCAT CACCGCATCG
GTACACTATG GGGATGGTGA GGTTGCAGAT ATTGAAAGAA AATCTGAACT TGGTGGGAAT
ATTCATGCCA AAGGGATGAT GATCCTATCG GCCTGCTTAT ACCGCATCTT CGGTAGAGAT
GCACCATTAC ACCTCAATGC CAATATTGTA TTTGAGCAAT CATACCAAGA AATCGATGGT
GATAGTGCGT CGCTAGCGGA ATATTGCTGC CTTATGTCGG CGATTGCAGA GCAGCCCATT
ATTCAATCTT TAGCCATCAC TGGAGCACTC GATCAATTCG GTAATGTACA AGCTATTGGT
GGCATTAACG AAAAAATTGA AGGCTTTTTT AATTTATGTG AACGGCGAGG CTTAACGGGT
GAGCAAGGCG TGATTATGCC TAGATCGAAT ATTTTACAAC TTAACCTCGA CCCAAAAGTG
ATAACAGCTG TAGGCAAAGG CTTATTCCAT ATCTATGCTA TTGAGCATAT GGATGAAGCC
GTTGAACTAC TGATGCAAAT GCCCGCGGGT GTTGCCGACG AAGATAATGA TTTCCCACAT
GATTCTTTGT ATGGTTTAGT GCAAGAAAGA CTGGATAAGC TTGCGGGTAA TGGAGAAGAG
GAAATTGGCA TAATGACGAG GTTACTCGCA AAATTGGGAT TATTTCGTCG TTAA
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| Protein sequence | MNSLLISTSS LAPEFSLPSL SQSAANLSAL LLGQERAVDA FKLHNAIAEQ QLYLADFPGI
DRHLMIRALM DTLTPISTAY LVATRPVDEA IQFQWQHKQP LDNQGCIAEK NVLYRYLSGN
IRRVDLLGRM VQSGNSSKYQ AGALAQCHYL FICAESLWKR ENLWDLVMQI LTQKEYQISS
TLSPVPLNCK IVLVGAGMIY SQVRSEDWQF QRHFTLLAEL ASEIDLMRYK ESQYAAWLQT
VAQSVDVTLE QSSLAPLFRY SARLTEHQRR LSLSMLDFAQ LMAQAKAYRG KPSINASDIE
YALSQANYRH NSSEEFSGQS FDDNFINLPT TGAMVGQING LTVIDAIDYS YGEPARITAS
VHYGDGEVAD IERKSELGGN IHAKGMMILS ACLYRIFGRD APLHLNANIV FEQSYQEIDG
DSASLAEYCC LMSAIAEQPI IQSLAITGAL DQFGNVQAIG GINEKIEGFF NLCERRGLTG
EQGVIMPRSN ILQLNLDPKV ITAVGKGLFH IYAIEHMDEA VELLMQMPAG VADEDNDFPH
DSLYGLVQER LDKLAGNGEE EIGIMTRLLA KLGLFRR
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