| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1604 |
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| Symbol | |
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| ID | 5079420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1827917 |
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| End bp | 1828603 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640498737 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001183128 |
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| Protein GI | 146292704 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00156809 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAAGCTG ATATGTCGAT TGTTGGGTTA TTTTTACAAG CCAGTTTATT AGTGAAATTT
GTGATGTTCA CTTTACTTGC CTTGTCAGTG ATGTCTTGGA CGGTGATTTT ACAACGCCGT
AGCCTATTAT CATCAGCAAA AGGTAAATCG GCAAAATTTG AAGATAAATT TTGGTCGGGC
GTAGATTTAA ACCGCCTGTA TAAAGAGTTA TCTGCTCGTC CCGATAATAC TGGCTTAGAG
TCATTATTCG TGACTGGTTT TAAAGAGTAT TCACGTTTAA ATAAATTAAA TAGCAAAGTG
CCAGATGCTG TGATGGACGG TACGTCCCGT GCCATGCGTG TGACGCTTTC TCGCGAAATG
GAAAAGTTAG AAGCTAACTT ACCGTTATTA GCGACTATTG GTTCAACGAG TCCCTATATC
GGTTTATTTG GTACTGTGTG GGGGATTATG AATTCTTTTA TTGCCATTGG TTCTATGGAA
AACGCCACAT TAGCGATGGT CGCTCCAGGT ATTGCTGAGG CATTGATTGC AACGGCGATG
GGTCTATTTG CGGCAATTCC AGCGGTTATT GCTTACAACC GTTTCTCGAC TCAAGTGGAT
AAATTGGAAA TGGCCTACGC AAACTTTATG GAAGAATTCT CCAGTATTTT GCATCGCCAA
GCGTACAGCG AGAAGGAAGG GGTATAA
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| Protein sequence | MQADMSIVGL FLQASLLVKF VMFTLLALSV MSWTVILQRR SLLSSAKGKS AKFEDKFWSG
VDLNRLYKEL SARPDNTGLE SLFVTGFKEY SRLNKLNSKV PDAVMDGTSR AMRVTLSREM
EKLEANLPLL ATIGSTSPYI GLFGTVWGIM NSFIAIGSME NATLAMVAPG IAEALIATAM
GLFAAIPAVI AYNRFSTQVD KLEMAYANFM EEFSSILHRQ AYSEKEGV
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