Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1600 |
Symbol | |
ID | 5079416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1822925 |
End bp | 1823599 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498733 |
Product | ribonuclease T |
Protein accession | YP_001183124 |
Protein GI | 146292700 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000738709 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA TTTGCGACGC GAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTA GTCATTGATG TCGAAACGGC GGGCTTCAAC TCTCAAACGG ATGCGTTGCT GGAAATAGCC GTCACCCTGC TGAAAATGGA TGATGAGGGC ATGCTAGGCA TTGATAAAAC CTTGCACTTC CATATAGAAC CATTTGAAGG CGCCAATTTA GAACCTGCAG CACTCGCTTT TAATGGGATA GATCCTAACA ATCCATTACG TGGCGCTGTC AGCGAAAAAG AGGCATTTTT AGACATTTTT AAAGCTGTCA AAAAGGCACA AAAAGCTGCT GATTGTCATC GCTGTATTAT TGTGGCCCAT AATGCCGCTT TTGATCATGG TTTTGTCAGT AAAGCGATTG AGCGTTGTGA CTTAAAACGC TCACCATTTC ATCCTTTTGC CACCTTCGAT ACCGCTACAC TCGCAGGACT TGCTATTGGT CATACCGTTT TAGCGAAAGC ATGTATGATG GCAGGTATTC CCTTTGACAA TAAAGAAGCC CACTCAGCGT TATATGATAC TGAACGCACA GCGGAGCTCT TTTGCTACAT AGTCAATCGC TGGAAACAAT TAGGCGGTTG GCCTTTACTG GCAGCAGCAG GTGCGCAAGA TGCTGAAAGT GACACTGAAG AATAA
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Protein sequence | MSDICDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG MLGIDKTLHF HIEPFEGANL EPAALAFNGI DPNNPLRGAV SEKEAFLDIF KAVKKAQKAA DCHRCIIVAH NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACMM AGIPFDNKEA HSALYDTERT AELFCYIVNR WKQLGGWPLL AAAGAQDAES DTEE
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