| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1592 |
|---|
| Symbol | asnB |
|---|
| ID | 5079552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1812741 |
|---|
| End bp | 1814405 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640498725 |
|---|
| Product | asparagine synthetase B |
|---|
| Protein accession | YP_001183116 |
|---|
| Protein GI | 146292692 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.134057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTTCAA TCTTTTCGAT TTTAGATATC CAATCTGATG CCAAACAACT GCGCCAAGTC
GCGCTAGAAA TGTCTAAGCT TATGCGCCAT CGTGGCCCTG ACTGGTCAGG TATTTATGCC
AGCGATAAAG CGATTCTTGC CCATGAGCGT TTAGCGATTG TTGACATTGA ACACGGTGCC
CAGCCGCTGC TGACTGAAGA TGGCAGTTTG ATCCTCGCGG TCAACGGCGA AATCTATAAC
CACAAAGAAT TGAAAGCCCA GTTAGGCGAT AAGTACAGCT ATCAAACCAA CTCTGACTGC
GAAGTGATCT TGGCGCTGTA TCAAGAATAC GGCACTGAAT TTCTAGATAA ATTAAACGGT
ATCTTCGCCT TTGTGTTATA TGACAAAGCT CAAGATAGTT ACCTTATCGG CCGCGATCAC
ATGGGTATCA TCCCACTATA CACAGGCCGT GACGCTGCGG GTAACTTCTA TGTTGCCTCA
GAGATGAAAG CCTTGATGCC AGTGTGTAAA ACCGTAGAAG AATTCCAACC TGGCCAATAT
TTTTATTCAA AGGATGGTGA AGCCGTTAAA TACTATAGCC GAGATTGGCA AAGCTATGAT
GCAGTTAAAG ATAATCCAGC CAGCCAAGAA GAATTGCGTG ACGCATTAGA AGCGGCGGTC
AAACGTCAAT TAATGTCAGA TGTGCCCTAT GGTGTGTTGC TGTCAGGCGG CTTAGATTCA
TCGATCATTT CCGCCATCAC CCAAACCTTT GCTAAGCGCA GAATTGAAGA TGATGGTGAG
ACCAACGCTT GGTGGCCACA GTTGCATTCC TTTGCCGTCG GTCTAAAAGG TGCGCCCGAT
CTTATCGCCG CCAAAAAAGT CGCCGATGCC ATTGGTACGA TTCACCATGA GATCCATTTC
ACCTTCCAAG AAGGCTTAGA TGCGATTAAA GAAGTGATCT ATCACTTAGA AACCTACGAT
GTCACCACCA TACGTGCTGC CACGCCAATG TATTTAATGG CGCGTAAAAT CAAAGCTATG
GGCATTAAAA TGGTGTTATC GGGCGAAGGT GCTGACGAGT TATTTGGCGG CTATTTATAC
TTCCATAAAG CGCCAAACGC ACAGGCATTC CACGAGGAAT TAGTGCGCAA ACTCGATAAA
CTGCATCTGT TCGATTGTCT GCGTGCCAAC AAAGCCATGG CCGCTTGGGG ATTAGAAGCT
CGCGTGCCCT TCCTCGATAA AGAGTTTATG GATGTGGCAA TGCGTATCAA CCCTGAAGCG
AAAATGTCTA AGGATGGCCG TATTGAGAAA CACATTCTGC GTAAAGCCTT TGAGCATAAA
TTGCCAAAAG AAGTGGCGTG GCGTCAGAAG GAACAATTCA GTGACGGCGT GGGCTACTCT
TGGATTGACG GTTTGAAAGA ACAAGCGGCG GCGCAGGTCG ATGATTTGCA ACTGGCGAAT
GCGAAATTCC GCTTCCCCTA TAACACGCCA GAAACCAAAG AGGCGTACTT CTATCGCTGC
TTCTTTGAGG AACATTATCC ACTGAGCGGC GCTGCTGAAA CGGTTCCAGG CGGTAAATCC
GTCGCCTGTT CAACACCAGA AGCACTAGCT TGGGACGAAA GCTTACGCGG CATTATCGAC
CCATCGGGCC GAGCAGTACG CTCAGTGCAT ACCGCAAGTT ATTAA
|
|---|
| Protein sequence | MCSIFSILDI QSDAKQLRQV ALEMSKLMRH RGPDWSGIYA SDKAILAHER LAIVDIEHGA
QPLLTEDGSL ILAVNGEIYN HKELKAQLGD KYSYQTNSDC EVILALYQEY GTEFLDKLNG
IFAFVLYDKA QDSYLIGRDH MGIIPLYTGR DAAGNFYVAS EMKALMPVCK TVEEFQPGQY
FYSKDGEAVK YYSRDWQSYD AVKDNPASQE ELRDALEAAV KRQLMSDVPY GVLLSGGLDS
SIISAITQTF AKRRIEDDGE TNAWWPQLHS FAVGLKGAPD LIAAKKVADA IGTIHHEIHF
TFQEGLDAIK EVIYHLETYD VTTIRAATPM YLMARKIKAM GIKMVLSGEG ADELFGGYLY
FHKAPNAQAF HEELVRKLDK LHLFDCLRAN KAMAAWGLEA RVPFLDKEFM DVAMRINPEA
KMSKDGRIEK HILRKAFEHK LPKEVAWRQK EQFSDGVGYS WIDGLKEQAA AQVDDLQLAN
AKFRFPYNTP ETKEAYFYRC FFEEHYPLSG AAETVPGGKS VACSTPEALA WDESLRGIID
PSGRAVRSVH TASY
|
|---|
| |