| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1580 |
|---|
| Symbol | |
|---|
| ID | 5079540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1798723 |
|---|
| End bp | 1799682 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640498713 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_001183104 |
|---|
| Protein GI | 146292680 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000016033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACAA AAATTCTCGG AACTGGTAGC TATCTGCCAG TGCAGGTGCG TAGCAATCAA
GATTTGGAAG AAATGGTGGA AACCACCGAC CAATGGATTG TTGAACGTAC TGGTATATCA
GAGCGCCGCA TTGCAGCGTT CGATGAAACC GTTTCAACTA TGGGCTATCA AGCGGCATTA
AAAGCGCTGG AAATGGCCGG CATAGAAGCA TCAGATTTAG ACATGATCGT TTGTGGTACC
ACCAGCGCGC CGAATGCTTT TCCTGCGGCG GCCTGTGAAA TCCAAGCTAT GCTTGGGGTA
CATACCATTC CTGCTTTCGA TATTGCAGCA GCTTGTTCAG GCTTTGTTTA TGCTTTATCT
GTTGCCGATC AATTTGTAAA AACGGGCGCC GCTAAAAAAG TATTAGTGAT CGGTGCTGAC
GTCTTGTCTC GTTTATGTGG GCCAGAAGAT CGCACGACAA TTATTCTTTT TGGGGATGGC
GCGGGCGCTG CCGTTATTGG CGCATCTGAA ACGCCAGGGA TCATTTCGAC TCATATTTAC
GCTGATGGGC GTCAAGGTGA TTTGCTCAAA TGTGCTTTCC CACCACGTAA AGGAGAAACT
TCTGAAGCGG TTGGGTTTAT GACCATGAAA GGCAATGATG TCTTTAAAGT GGCAGTGACT
CAGTTGTCCC ATGTCGTGAC TGAGACTTTA CGCATTAACA ATATCGATAA GTCAGAAATT
GATTGGTTAG TGCCACATCA GGCCAACTTC CGCATTATTA ATGCTACCGC GAAAAAGCTC
GATATGAGCT TGGATAAAGT CGTATTGACC TTAGCTAAAC ATGGTAATAC TTCAGCCGCG
TCAGTACCCA TTGCATTAGA TGAGGCCGTG CGTGATGGAC GAATTCAACG TGGGCAATTA
TTGCTACTTG AAGCCTTCGG TGCGGGATTT GCGTGGGGCA GTGCACTAGT ACGTTTCTAA
|
|---|
| Protein sequence | MHTKILGTGS YLPVQVRSNQ DLEEMVETTD QWIVERTGIS ERRIAAFDET VSTMGYQAAL
KALEMAGIEA SDLDMIVCGT TSAPNAFPAA ACEIQAMLGV HTIPAFDIAA ACSGFVYALS
VADQFVKTGA AKKVLVIGAD VLSRLCGPED RTTIILFGDG AGAAVIGASE TPGIISTHIY
ADGRQGDLLK CAFPPRKGET SEAVGFMTMK GNDVFKVAVT QLSHVVTETL RINNIDKSEI
DWLVPHQANF RIINATAKKL DMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL
LLLEAFGAGF AWGSALVRF
|
|---|
| |