Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1577 |
Symbol | |
ID | 5079537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1796957 |
End bp | 1797481 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498710 |
Product | hypothetical protein |
Protein accession | YP_001183101 |
Protein GI | 146292677 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000216707 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAG TAAAGATACC GGTTTCAATT GATCCATTTC GTGCTGCCTC AAGCCGCCTT ACTTATAATG GGGTTGTGCC TGGGCAGTAT TTGAAAAGAT TAAATGAGTT ATGTGCCGGC GACTGTTCCG ATGTGGCAGT GTCGATTGAA TGTGGCGTGG ATTTACAGGG GATAGTCTAC CTGAAAGGGA AGGCTGTGAC GGAGCTCACT CTGATATGTC AACGTTGCAT GACACTATTT ACCACTGAGG TTACGGTCGA GTTTTGCTTC GGTCCATGCC GGACTAAGGC AGAAATCGAT GAGCTCCCGG ATGCGTATGA CCCAATTGAG TGCAATGAAA TTGGCGAAGT ACGTCTGCAT CAATTGATCG AAGATGAATT GATAGTCGCT ATGCCGATAA TTCCGCTGCA TCAAGAAATT GATTGCACAA TAGGATCTAA AGACATAGTT GTAGGCGAGA TCGAACCCGC TCAAGAGGAG CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
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Protein sequence | MQTVKIPVSI DPFRAASSRL TYNGVVPGQY LKRLNELCAG DCSDVAVSIE CGVDLQGIVY LKGKAVTELT LICQRCMTLF TTEVTVEFCF GPCRTKAEID ELPDAYDPIE CNEIGEVRLH QLIEDELIVA MPIIPLHQEI DCTIGSKDIV VGEIEPAQEE RPNPFAVLEK LKSK
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