| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1572 |
|---|
| Symbol | |
|---|
| ID | 5079532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1789282 |
|---|
| End bp | 1789491 |
|---|
| Gene Length | 210 bp |
|---|
| Protein Length | 69 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640498705 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_001183096 |
|---|
| Protein GI | 146292672 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.259211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAG TTACTGGTGT TGTTAAGTGG TTCAATTCTG ACAAAGGTTT CGGATTCATT
GAACAAGAAT CAGGTCCAGA TGTATTCGTA CACTTCCGTG CGATTAACTC TGACGGTTTC
AAAACTCTTG ACGAAGGTCA AAAAGTGTCT TTCACTGTGA CTCAAGGTCA AAAAGGTCCA
CAAGCTGAAA ACGTAACCAT CATTGGTTAA
|
|---|
| Protein sequence | MSQVTGVVKW FNSDKGFGFI EQESGPDVFV HFRAINSDGF KTLDEGQKVS FTVTQGQKGP
QAENVTIIG
|
|---|
| |