Gene Sputcn32_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1533 
Symbol 
ID5079592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1751294 
End bp1752589 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content41% 
IMG OID640498666 
Productpeptidase M23B 
Protein accessionYP_001183057 
Protein GI146292633 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00239746 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGACAG GCAAACCCAA TTTGATCAAT TTTTCGCAAC CCCGTTTGCA GAATTTATCA 
TCAACTCATA AGAATATTCT ATTAGTGGGC GGTTTATTGA TCGGTGCAGC TATGCTATTA
CCGAATAATA ACCATGTCGT GCCAACAACT CAGCGTATCC CTGTCGTTCT TGATATTGAG
AATATCTTAC CTCAGACTTC TGAATCTATT GAACAAGCTG CTATCATAGA TAATACGCCT
GATTTTGAGC GTATTATCGT TTCTGGAGAT ACCCTAAGCG GTCTATTTTC AAAAGCAGGT
GTTGATCATC AAACTATGTA TAGGGTGTTG GAAGCCGATC TCAATATTCT TGCCCTTGAT
ACCTTATTAC CTGGTAACCG GATCCAGTTT TGGCTGGATA ATGATGGGCA ATTACAAAAG
TTAGAGTTGT ATTTTAATGC GGCACGCCAA GTCGTATTTA CTCGTTATGA GGATGGCAGC
TTTAACGTTG AAGAAGTCAA CGTAGAAGGT GTTTGGCAAA ATCGAATTTT AACGGGTGAT
ATTAAAGGTT CATTTTACGT ATCAGCACAA AAAATGGGGT TAGCTGCTGC GGATATTCAA
CGTATTGAAG ATTTACTCAA AGAGAAAGTC AATTTCGCGC GTGACTTGCG TGCAGGCGAT
AAGTTTTCGG TTTTGGTAAA TGATCAATAT GTTGAAGGTG AAGCGACAGG AAGCAGCCAG
ATATTGGGCG TAACAATTAA AACTGGCCGT TCTGAAGTGA GTGCTTTTCA GCATACTGAT
GGTAGTTATT ATGATGCGAA AGGGCAGAGT TTGGTTCGTG CATTCCAGCG TATTCCATTA
GCGAAACAAC CTCGTATGAG TTCTCGTTTT AATGCCTACC GTAAACACCC TATTACTGGT
CGAATTTCTC CCCATAATGG TACGGACTTT TCAGTGCCTA TTGGTACTAA GGTGATTGCA
CCGGGTGATG GCGTTGTCAG TTTAGTAACG GATCATCAAT TTGCAGGTAA ATATATTGTT
ATCGAACATG GTGGTAAATA CCGTACCCGT TATTTACATC TTTCCAAATC CCTTGTACGT
AAAGGTCAGC GAGTGACTCG AGGGCAAGTG ATTGCTTTAT CAGGTAATAC CGGCCGTTCA
ACGGGCCCAC ATTTGCATTA TGAGTTCCAT ATTAATGGTA AACCAGTTGA TCCTATGAAA
GCGGATATCC CAATGTCTAG TCAATTAGCA AATCAAGAAC TGAGAACCTT TACAAATTTG
GTTAAGAGCC GCCAAGCTTT AATGGATTTA GGTTAA
 
Protein sequence
MQTGKPNLIN FSQPRLQNLS STHKNILLVG GLLIGAAMLL PNNNHVVPTT QRIPVVLDIE 
NILPQTSESI EQAAIIDNTP DFERIIVSGD TLSGLFSKAG VDHQTMYRVL EADLNILALD
TLLPGNRIQF WLDNDGQLQK LELYFNAARQ VVFTRYEDGS FNVEEVNVEG VWQNRILTGD
IKGSFYVSAQ KMGLAAADIQ RIEDLLKEKV NFARDLRAGD KFSVLVNDQY VEGEATGSSQ
ILGVTIKTGR SEVSAFQHTD GSYYDAKGQS LVRAFQRIPL AKQPRMSSRF NAYRKHPITG
RISPHNGTDF SVPIGTKVIA PGDGVVSLVT DHQFAGKYIV IEHGGKYRTR YLHLSKSLVR
KGQRVTRGQV IALSGNTGRS TGPHLHYEFH INGKPVDPMK ADIPMSSQLA NQELRTFTNL
VKSRQALMDL G