| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1532 |
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| Symbol | |
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| ID | 5079591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1747972 |
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| End bp | 1751028 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498665 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001183056 |
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| Protein GI | 146292632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000252521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCAC TTAGCCTTTC CATGTCAGCT TTTGGCCCCT TTGCATCGAC GCAACAACTT
GATTTTACGG CCTTAGGGAC TAATCCGTTA TTTTTGATTA ATGGACCCAC TGGTGCGGGT
AAGACGACCT TGCTCGATGG TATTTGCTTT GCCCTCTATG GCAAAACCAC GGGTAATGAG
CGTGAAGGCA GCCAGATGCG CTGCGATATG GCCGATGATA GTTTGCTAAC AGAAGTCACT
TTTAGTTTTC AGTTGGGTAA TAGCTGTTAT CGTATTCGCC GTGTGCCAGA GCAAGACAGA
GTTAAAAAAA GCGGTGACGG CTCAACGGTG CAAAAGCCCG AAGCTCAGTT ATATAAGATA
GACGCCGAGG GTAATGAAAG TTTGCTTGTA GCGAGCAAAG TCTCTGAGGC AACCGCTGAG
ATTGAAGCCT TAACTGGCCT CGATGTGGAG CAGTTTCGCC AAGTGATGGT GTTGCCGCAG
GGAAAATTTC GCGAATTGTT AATGGCAGAC TCTAAAGCCA GAGAACTGAT ATTTAGTCAG
CTATTTCAAA CGCATATATA CCGACGTATT GAAGATTCCT TAAAAAGTAA GGCTGCAGAT
ATCCGCGCCT TAGTGAAAGA TCAACGTAGC CGCCGTGATG GCATTTTACA AAGTGCGGGT
TTAGCATCCG ATGACGAGCT TAGCTGTGAA TTAGCCAAGC TTACGCCAGA ACTTGAAACA
GCCCAAAGTG CGAAAGAACA GGCATTACAG CAGCAACAAT GGGTGATAAA AACCAGCGAT
GCCGCCCAGC ATTTATTGGC CGAATTTGCG CAGTTTGATG CCTTAACTCA AACGGTTGCT
GCGCTTGATG CACAGCAAGA AAACATGGCT GCGCAAACCT ATAAACTGAA TTTGGCTAAA
CAGGCGCAGC ACATGGCACC CATGCTTGAG GTGTTTGTGG CTCGTGAGCA GGAAGCCAAG
GCGGCAAGTC TTGCCCTTGA ACATGCGAAA ACAGCATTAA TCCATGCTAA ACAAGCCTTC
GATAACGCAG AGCTTAAGAC CGCTGATTTG CCCGTGTTGG AAGCGTCGTT ACTCGAACAG
GAACAGGTTA AACAGCAACT GAATGCGTTA GGACCGCAGC TTAGGGAATT GGATAGGCTT
AGTAAAACCC TCGAACAAGA GCAAGCGCAG CTAATTAGCG CGAAAACACA ACTTCAGAAC
AGCAAACATG AGTTAACCAC CGTAGTCCAA AAACGCCGTG AATTAGAGTC CGCTTTGCCG
CAACTACAGG CCAACAGCGA AACTCGCCTC TCATTGCAAC AAGCGCACCA GCAGCAACAG
CAATTATTGT CGACTTATCA GCAATGGCAA CAAGTGGTGG CAAGGGTATC GTTGACACAG
GCAAAACTTG TTGAGGCTAA AGTCAAAGGG CAACAACTCA GTGCTCAGCA TCAGCAAGCA
CAGGTTGCAT ATAAAGCTTT ATTGTTGACT TGGCATCAAG GACAGGCCGC TATTTTAGCG
CGGCAATTAC AGCAAGATGA ACCTTGCCCT GTTTGTGGTA GCCAAACACA TCCACAGCCA
GCACAAAGCC AAGAGCCACT CCCAAGTGAT GAAGTGCTGC AATTAGCACT AGAGGCTGAA
ACGAATGCCC AAGAAATCCT GAGCAAAGCC AGAGCGGAAT ATCGTGGGCT ACAAACGCAG
CTAGAAACTT TGCAACAGCA AGCACAAGAT CTCGCGGTCC AATTGGGCAC TGCGGTTGAT
ATTCCTTTAG ATGAACATAC GCATACTTTG TCGCAATACG CTTTCTCACT CACTCAAGCG
GAGCAAGCCC ATCAGCAGTT ACAGCTGTTA CAGCAAGAGA TTGCATTGTT GCACGCACAG
GAAACGCATC TACAACAAAA GCTAGAGCAA GGGCAAACAC ACGACAGTGC ACTGCAATCT
AAAGTGGATA TATTGCAGGG GCAGTTAGCA CACATGCAGC AAAGTGTTCC ATCTGCACTT
ACAACGCTTG AGGCCTTAAC TGCAGCAATA GCGCAAAATC AGCAAAGTAT TAGCCAAATT
AAGCAACAGA TTACTAGTGT TAGGGATCTC CAACAACAGA CTGGCCAATC TTTTGTTGCG
GCTAAAGCGG CACTTAATGG TGCTGAAAAT GCTGCTGAGG CGGCATTAGC CCAGCAAACG
CGTGCACAGC AGCAACTCAA TCAGCAATTA GTCGTAGCAG GTTTTGCCGA TCAACAGGCC
TTATTTGAGG CCATGCTCGA TGAAGAACAA CAGCGTGCAT TAGCCAGCGA GATTGAGGCT
TACCAGCAGC GCAGTGCTTT GACCAAGGCC CAGTGTGAAC AGTTAGCGCT TAAGCTTAAA
GATAAAGTGC CACCTGATAG CATTAAGCTC GCTGCCGAGC TTGAGTCGGC GCAGCAAGCA
TTACACGCAG CAGAGCAGGC ATGGCAGCTG CTTCACACCC GCACAGTATT ACTGATGCAA
ACCCAAACCC AGCTGAGTAT TGCCGATGCA AAAGCTAAGG TTTTGGAAGA TGAATATGCG
GTTATCGGTA CCCTCGCAGA TGTCGCTAAT GGAAATACAG GTAATAAGAT CAGCCTGCAA
CGTTTTGTGT TAAGTGTACT GCTCGATGAT GTGCTGTTGG AGGCAAGCCA CAGGTTACAT
CTGATGAGCA AAGGGCGTTA CCGTTTATTG CGTAAGGAAG ATAGGGCCAA GGGCAACAAA
GCGTCAGGGC TCGAATTGGA AGTAGAAGAT GCTTACACCT CCAAAGTGCG TCCTGTGGCC
ACATTAAGTG GTGGAGAAAG TTTTATGGCT GCATTATCGA TGGCGCTTGG TTTATCCGAT
GTAGTACAAG CCTATGCCGG TGGTATTAAA CTCGATACCT TATTTATTGA CGAAGGTTTT
GGTAGTTTAG ACCAAGATTC TTTAGAGCTG GCCATTCGTA CTTTAATGGA TTTGCAATCC
TCAGGCCGGA TGATAGGGGT GATCTCCCAT GTTTCAGAGA TGAAAGAGCA GATAAATACC
CGTATTGATA TACATAAAAC CTCACATGGG AGTGAAATGA CGATAGTTTT GCCTTAG
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| Protein sequence | MRPLSLSMSA FGPFASTQQL DFTALGTNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE
REGSQMRCDM ADDSLLTEVT FSFQLGNSCY RIRRVPEQDR VKKSGDGSTV QKPEAQLYKI
DAEGNESLLV ASKVSEATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKARELIFSQ
LFQTHIYRRI EDSLKSKAAD IRALVKDQRS RRDGILQSAG LASDDELSCE LAKLTPELET
AQSAKEQALQ QQQWVIKTSD AAQHLLAEFA QFDALTQTVA ALDAQQENMA AQTYKLNLAK
QAQHMAPMLE VFVAREQEAK AASLALEHAK TALIHAKQAF DNAELKTADL PVLEASLLEQ
EQVKQQLNAL GPQLRELDRL SKTLEQEQAQ LISAKTQLQN SKHELTTVVQ KRRELESALP
QLQANSETRL SLQQAHQQQQ QLLSTYQQWQ QVVARVSLTQ AKLVEAKVKG QQLSAQHQQA
QVAYKALLLT WHQGQAAILA RQLQQDEPCP VCGSQTHPQP AQSQEPLPSD EVLQLALEAE
TNAQEILSKA RAEYRGLQTQ LETLQQQAQD LAVQLGTAVD IPLDEHTHTL SQYAFSLTQA
EQAHQQLQLL QQEIALLHAQ ETHLQQKLEQ GQTHDSALQS KVDILQGQLA HMQQSVPSAL
TTLEALTAAI AQNQQSISQI KQQITSVRDL QQQTGQSFVA AKAALNGAEN AAEAALAQQT
RAQQQLNQQL VVAGFADQQA LFEAMLDEEQ QRALASEIEA YQQRSALTKA QCEQLALKLK
DKVPPDSIKL AAELESAQQA LHAAEQAWQL LHTRTVLLMQ TQTQLSIADA KAKVLEDEYA
VIGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLEASHRLH LMSKGRYRLL RKEDRAKGNK
ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLEL AIRTLMDLQS SGRMIGVISH VSEMKEQINT RIDIHKTSHG SEMTIVLP
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