| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1531 |
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| Symbol | |
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| ID | 5079590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1746830 |
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| End bp | 1747975 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498664 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001183055 |
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| Protein GI | 146292631 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0738681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA TCCACACCTC GGACTGGCAC ATAGGTCGTC AATTACACAA TCAATCACTA
CTGGATGATC AAGCTTTTGT GCTCGAGCAA ATCATTGCTT TAGCGGATGA ACACAAGGTG
GATGCCGTGA TTGTGGCGGG GGATATTTAT GACAGATCGA TTCCGCCTGC GAATGCGGTT
GCGCTGTTAG ATGATGTGCT TAACCGCTTA GTGCATGATT TGGGCCTGCA AGTCATTATG
ATTGCGGGTA ACCACGATGG TCACGAGCGC TTAGGTTTTG CAGCAAAACA AATGGCGGCA
AGTGGGTTAC ATATTATTGG GCCTTTGAGT GCTGACATTC ATCCCATTAC TTTATCGAGT
TCAAGCGGTG ATGTGGTGTT TTATCCCTTG CCCTATGCCG AACCTGCCAC AGTGCGCCAA
GTTTTTGAGT GTGAGGCGGC AAGCCATGAG GCCGCAATGA CGCTATTGCT TGAACAAGTA
CGCCAGCACG ATAGCCAAGG TTTGCCGAAA GTGGTGATAA GCCATTGTTT TTTGGATGGT
GGTAGCGAGT CAGAATCTGA GCGGCCACTG AGCATTGGTG GCGCCGATAA AATATCGCCA
ACGCTATTTA CTGAGTTTGA TTATGTCGCC CTTGGACATT TGCACGGACC GCAATACAAA
GGTGCAGAGC ATGTGCGCTA CTCAGGATCG ATTTTGAAGT ATTCCTTTAG CGAACAACAT
CAACATAAGT CGGTGACCTT AGTCGAACTT AGCGCGCAAA CGCCGATTAA AATTCGTTTA
TTGCCATTAA CGTCAATACG CGATGTCCGC ATCTTAGAAG GGGAGTTAGC CACATTACTC
GTCCAAGGTA AAACGGATAT CAAGCGTGAG GACTACCTTA TGGTCAGACT CCTTGATAAA
CATGCTATTT TAGATGCTAT GGGAAAATTG AGAGCCGTTT ACCCTAATGT GCTGCATTTA
GAACGAACTG GTCTGATGGC GGGGCAGCAA CAAGTTACCT TGAGCCGAGA TCATATCAAA
AAAGGCGAGA TGGACATGTT CCGTGACTTT TTCTCTCAAG TATCCGGCGA GTCATTAACA
CAAGCGCAGC AAGCTGTAAT GGATGAACTC CTGACTAAGC TACACAATGA GGAGCGCCAA
GCATGA
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| Protein sequence | MKFIHTSDWH IGRQLHNQSL LDDQAFVLEQ IIALADEHKV DAVIVAGDIY DRSIPPANAV
ALLDDVLNRL VHDLGLQVIM IAGNHDGHER LGFAAKQMAA SGLHIIGPLS ADIHPITLSS
SSGDVVFYPL PYAEPATVRQ VFECEAASHE AAMTLLLEQV RQHDSQGLPK VVISHCFLDG
GSESESERPL SIGGADKISP TLFTEFDYVA LGHLHGPQYK GAEHVRYSGS ILKYSFSEQH
QHKSVTLVEL SAQTPIKIRL LPLTSIRDVR ILEGELATLL VQGKTDIKRE DYLMVRLLDK
HAILDAMGKL RAVYPNVLHL ERTGLMAGQQ QVTLSRDHIK KGEMDMFRDF FSQVSGESLT
QAQQAVMDEL LTKLHNEERQ A
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