| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1529 |
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| Symbol | |
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| ID | 5079588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1744611 |
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| End bp | 1745516 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498662 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001183053 |
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| Protein GI | 146292629 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAGTG AACTACCACC ACTTAATGCC CTTAGAGCCT TCGAAGCGGC AGCACGACTC
CAAAGTATGA CACTTGCGAG TAAAGAACTG CATGTTACTC ATGGTGCAAT TAGCAAACAA
ATCAGGATAT TAGAAGAATA TTTAGGGTTT GCACTCTTTG TCCGTCTCCA CAAAAAAGTG
GGGCTAACCG ACGAAGCTCA ACGCTATTTA CCCCATGTAC AAGCCGCTCT ACAAACCTTA
TCGAGTGCTA CAGGTGATTT ACGCCGCCAG AGCACAAGGC CGCAAACTTT AGCAATTAAT
GTGCTACCAA GCCTAACGAT TAACTGGCTT ATTCCTAGAA TGGAGCAATT TAAATCCCTC
CACCCTCACC TTTATGTCGA TTTATCCATT GGGGATTTTG CGGTGGATTT TAACCAAGGC
CGTTATGATA TTGCGATCCG CAGTAGCACC GTCATACCTA AAGGAGTCAA TTATATCAAA
CTGATGGATG AGGATTTATG CCTCGTGTGT GCTCCCTCAT TAGCACCAAA ACTCAAGACT
ATTGCTGATA TCAATCATGT CACCTTACTT AAGCACACGA CCAGACCAGA ACTATGGGAC
TATTGGGCGA AAAAAGTAGG ACTTGTGTTA ACTCAAGAAC AAACTTTCGG GGTCGAACAC
TTTTATATGT TAAGCCAAGC GGCAGCGAGT GGCATGGGTG CAGCACTTAT TCCACGATTT
TTTATTGAAG AACAACTATC AAATGGCAGC TTAGTCATCC CCTTCGATGC GCCTTTTATT
AGCCCCTATG CTTATTACCT ACTCACACCA AAATCGCCCA GCTTACCATT AAAAGTCCAA
GCGTTTATTG ATTGGTTATT AGAGATTTTT GCCCCCTATC GCCAATCAAT TTATGAACAA
CCTTAA
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| Protein sequence | MYSELPPLNA LRAFEAAARL QSMTLASKEL HVTHGAISKQ IRILEEYLGF ALFVRLHKKV
GLTDEAQRYL PHVQAALQTL SSATGDLRRQ STRPQTLAIN VLPSLTINWL IPRMEQFKSL
HPHLYVDLSI GDFAVDFNQG RYDIAIRSST VIPKGVNYIK LMDEDLCLVC APSLAPKLKT
IADINHVTLL KHTTRPELWD YWAKKVGLVL TQEQTFGVEH FYMLSQAAAS GMGAALIPRF
FIEEQLSNGS LVIPFDAPFI SPYAYYLLTP KSPSLPLKVQ AFIDWLLEIF APYRQSIYEQ
P
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