| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1520 |
|---|
| Symbol | |
|---|
| ID | 5079579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1737791 |
|---|
| End bp | 1738195 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640498653 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_001183044 |
|---|
| Protein GI | 146292620 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTA AAAAGCATTC CAGTGTAGAC GAGGAAGCGC AAATTGACAT GACACCGATG
TTAGACATCG TGTTTATCAT GCTGATCTTC TTCATTGTGA CAACGTCATT CGTGAAACCA
TCTGGTTTGG ACTATAACAA ACCTAAAGCT TCACAAGCGA CTTCTAAGCC TTCGGCTAAC
ATCTTTATTG GCGTCAGTAA AACAGGCGTT ATTATGATGG AAAACCGTCA GGTTGATATC
GAACGTGTGA CCGCAAACGT TGAGCGTATG CTAGCTGAGG CTCCAGAGGC TGCAGTGCTT
ATCCAAGCGG ATAAAGACAC GCAACACGGC TTAGTGGTTA AAGTTCTAGA CCAAGTCAAA
GCGGCTGGTA TAGATAAGAT TTCGGTTGCT GCGGGGAACG ATTAA
|
|---|
| Protein sequence | MARKKHSSVD EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSAN
IFIGVSKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADKDTQHG LVVKVLDQVK
AAGIDKISVA AGND
|
|---|
| |