| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1488 |
|---|
| Symbol | |
|---|
| ID | 5079640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1696856 |
|---|
| End bp | 1697710 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640498617 |
|---|
| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_001183012 |
|---|
| Protein GI | 146292588 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000791428 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCC AAATAATCGA CGGCAAGGCG ATTGCTCAAT CCATCCGCAC TAAGCTCAGC
GAAAAAGTCA CCGCCCGCAA AGAGGCTGGA CAACGCGTAC CGGGTTTAGC CGTAATATTA
GTGGGAGCCG ATCCGGCATC ACAAGTTTAT GTTGGCAGTA AACGTAAGGC CTGTGAAGAA
GTTGGATTTA TTTCTCGTTC ATACGATTTA GAAACAAACT GCACTGAAGA TGAATTACTC
AACCTGATTG ATAGTCTTAA TGATGATCCG ACAATTGATG GCATTTTAGT GCAACTGCCA
TTACCCGCAC ATATCGAAGA CTCAAAAGTC ATCGAACGCA TTCGCCCCGA TAAAGATGTC
GATGGATTCC ACCCCTATAA CGTTGGCCGT TTAGCCCAGC GTATTCCAGT GCTGCGCTCT
TGCACTCCAA TGGGGATCAT GACCTTAATT AAATCGACTG GTGTCGATAC CTATGGTTTA
GATGCGGTTG TGGTTGGTGC CTCAAATATC GTTGGCCGCC CTATGACTTT AGAATTACTG
CTAGCGGGCT GCACAACAAC GACATGTCAT CGTTTTACTA AGAATCTCGA GCAAAAAATT
CGCCAAGCCG ATTTAGTTGT AGTTGCCGTG GGTAAACCCG GCTTTATTCC TGGCGAGTGG
ATAAAACCGG GCGCGATTGT GATCGATGTG GGCATTAACC GTTTAGATAA CGGCACCTTA
GTCGGTGACG TGCAATATGA GGCTGCAGCG CAAAACGCCA GTTTTATCAC GCCAGTCCCC
GGCGGTGTTG GCCCGATGAC GATTGCAAGC CTATTAGAAA ACACCTTATA TGCCGCCGAG
CAATATCATG ACTAG
|
|---|
| Protein sequence | MTAQIIDGKA IAQSIRTKLS EKVTARKEAG QRVPGLAVIL VGADPASQVY VGSKRKACEE
VGFISRSYDL ETNCTEDELL NLIDSLNDDP TIDGILVQLP LPAHIEDSKV IERIRPDKDV
DGFHPYNVGR LAQRIPVLRS CTPMGIMTLI KSTGVDTYGL DAVVVGASNI VGRPMTLELL
LAGCTTTTCH RFTKNLEQKI RQADLVVVAV GKPGFIPGEW IKPGAIVIDV GINRLDNGTL
VGDVQYEAAA QNASFITPVP GGVGPMTIAS LLENTLYAAE QYHD
|
|---|
| |