Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1478 |
Symbol | |
ID | 5079630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1682048 |
End bp | 1684039 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498607 |
Product | decaheme cytochrome c |
Protein accession | YP_001183002 |
Protein GI | 146292578 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000254716 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACG CATATAAATC TAAAATCGCA CTGCTGTTAG CAGCAAGTGC AGTCTCTATG GCCTTAGTAG GCTGTGGTGG CAGCGATGGT AATGATGGTA ATCCTGGAGA AACTGGTGGC GAGCCTGCTG GTGCAATCCA AACATTAAAC TTCAACTTTG AGAAAGCCTT AATAAAGGAC GGCTTGCCGA GCCTTCAATT TCGGGTAACT AACGAAGATG ATATGCCCGT TGTTGGGCTT CAATATTTCA AGTTTTACGC TGAGCAACTG GTTCCTCAGG GAGCAACAGG TGCTGGTGAT GCGTCAAAAT GGCAGTATCT TATCGATGAA ACTTGTGATT TAACACCTGC AGTCAAAAAA TGTACTGGTA CGTTAGTCGA TCACAAAAAT GGTACCTACA GCTATGACTT CGGTACTAAC CTCAAAACAA GTACCCGTGC AACCTATAAC GGTGAGTTAG CCCAGCGTAT TGTACTGAAT AACTATGTTC GCGGCAGTAC ACCAGCACCA TTACCTGATG GCACCACGCT ACCTGTCTTT ACTGGCATAT TTGACTATAT GGCAGACACG GGTGCTGATG CGACTTACAG CCGTAAAATC GTTGCAACTG AAAGCTGTAA TACTTGCCAC GATAAAGTGA TTAACGCCAA ACATTACACC AATGATGTTA ATTTCTGTGC GAGTTGCCAT ACTCCTGGCC GAGTAAAAGC AGGCAATGAA TTTAATGTGT TAGTCCATGC TAAGCATAAA GACTTAACCT TAAATGCATT AGATAGCTGT CAAAGCTGCC ACGCTGAAAG TGATGCTGCG CCAGATTGGA GTAATTGGTC ACGTATCCCA ACCGCTGCTA CCTGTGGTAG CTGTCACAGC ACAGTGGACT TTGCCGCAGG TAAAGGCCAT TCACAACAGC TTGATAACTC AAACTGTATC GCCTGTCATA ACAGTGCTTG GACCGCTGAA CTTCATACGG TGAAAACCGC TAATAAGAAA GTTTTAATCA ACAAATATGG GATTGAAACA AGCTCAATTG TAAATCCAGA AACTAAAGCA GCGACAATAA GCATACAAGT GACTGATAGT AAAGGTGCTC CTGTTGATAT TACTGCCTTA CTACCTCAGA TCCAACGTGT TGAAATTATT ACTAACGTTG GCCCCAATAA CATCACTTTG AGTTATTTCA CTAAAGATTC AGTCATAGCG GTTAAAAATG GTGTGCTTGA TTCTAACGCA AGTATTGTTG ACGGTAAGCT GCTTTACACT ACTACTAAAC CACTGCCTTT TGGTGCTGCA AAAACAGATA CTGACACCTC TGTCACTTTT GTAAACTGGG CTATGTGCTC TCTAAATGGT CAATTTGTAA CATGTGCAGA ACCAACATTT GATGGTGCTG ATGTTAGTAA ATACACATCC ATGAAAGCAG ATATCGCCTT TGCAACATTA TCTGGTGAAA AACCAAGTAC TCGCCACGTG GATTCAGTAA ACTTTAGTAC TTGTGCTAAT TGCCATGGTA CAGAGTGGGA GTCTCGATAT CACAAAGGTA AAAACAGCCC AGGTTTCGTG ATGTCAGAGC AACTTGCTCA TAGTAAGGAC GCCGCAGGTA AACCGATTGT TGGTCTTGAT GGTTGTGCGA CTTGCCATAC TCCACATGGT ACTTACGCAA GTGGTGCTAA CAAAGGTGCA TTGGAGATGA AATTACACGT TGTTCACGGT AAACAAGGTG TCATCAAAGA ATGTACTCAA TGTCATAACG ACTTCAACCT CGATTCATTC AAGGTCAAAG GCGCTCTGGC AACTGCTGCG GGTAAATACA CCACACCAAT CACAGCCACT TGTATTTCAT GCCATACGCC AGAATCCATT GGCCACGGCT TAGAAAATAT GGGCGCGATT GTGAACGGTG ATTACACCCA AGCCAACCAG GCAGTGCAGT CAGAAACCTG TTTCTACTGT CATAAACCCA CTCCAACAGA TCACACTCAA GTGAAAATGT AA
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Protein sequence | MMNAYKSKIA LLLAASAVSM ALVGCGGSDG NDGNPGETGG EPAGAIQTLN FNFEKALIKD GLPSLQFRVT NEDDMPVVGL QYFKFYAEQL VPQGATGAGD ASKWQYLIDE TCDLTPAVKK CTGTLVDHKN GTYSYDFGTN LKTSTRATYN GELAQRIVLN NYVRGSTPAP LPDGTTLPVF TGIFDYMADT GADATYSRKI VATESCNTCH DKVINAKHYT NDVNFCASCH TPGRVKAGNE FNVLVHAKHK DLTLNALDSC QSCHAESDAA PDWSNWSRIP TAATCGSCHS TVDFAAGKGH SQQLDNSNCI ACHNSAWTAE LHTVKTANKK VLINKYGIET SSIVNPETKA ATISIQVTDS KGAPVDITAL LPQIQRVEII TNVGPNNITL SYFTKDSVIA VKNGVLDSNA SIVDGKLLYT TTKPLPFGAA KTDTDTSVTF VNWAMCSLNG QFVTCAEPTF DGADVSKYTS MKADIAFATL SGEKPSTRHV DSVNFSTCAN CHGTEWESRY HKGKNSPGFV MSEQLAHSKD AAGKPIVGLD GCATCHTPHG TYASGANKGA LEMKLHVVHG KQGVIKECTQ CHNDFNLDSF KVKGALATAA GKYTTPITAT CISCHTPESI GHGLENMGAI VNGDYTQANQ AVQSETCFYC HKPTPTDHTQ VKM
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