Gene Sputcn32_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1478 
Symbol 
ID5079630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1682048 
End bp1684039 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content43% 
IMG OID640498607 
Productdecaheme cytochrome c 
Protein accessionYP_001183002 
Protein GI146292578 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.54716e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACG CATATAAATC TAAAATCGCA CTGCTGTTAG CAGCAAGTGC AGTCTCTATG 
GCCTTAGTAG GCTGTGGTGG CAGCGATGGT AATGATGGTA ATCCTGGAGA AACTGGTGGC
GAGCCTGCTG GTGCAATCCA AACATTAAAC TTCAACTTTG AGAAAGCCTT AATAAAGGAC
GGCTTGCCGA GCCTTCAATT TCGGGTAACT AACGAAGATG ATATGCCCGT TGTTGGGCTT
CAATATTTCA AGTTTTACGC TGAGCAACTG GTTCCTCAGG GAGCAACAGG TGCTGGTGAT
GCGTCAAAAT GGCAGTATCT TATCGATGAA ACTTGTGATT TAACACCTGC AGTCAAAAAA
TGTACTGGTA CGTTAGTCGA TCACAAAAAT GGTACCTACA GCTATGACTT CGGTACTAAC
CTCAAAACAA GTACCCGTGC AACCTATAAC GGTGAGTTAG CCCAGCGTAT TGTACTGAAT
AACTATGTTC GCGGCAGTAC ACCAGCACCA TTACCTGATG GCACCACGCT ACCTGTCTTT
ACTGGCATAT TTGACTATAT GGCAGACACG GGTGCTGATG CGACTTACAG CCGTAAAATC
GTTGCAACTG AAAGCTGTAA TACTTGCCAC GATAAAGTGA TTAACGCCAA ACATTACACC
AATGATGTTA ATTTCTGTGC GAGTTGCCAT ACTCCTGGCC GAGTAAAAGC AGGCAATGAA
TTTAATGTGT TAGTCCATGC TAAGCATAAA GACTTAACCT TAAATGCATT AGATAGCTGT
CAAAGCTGCC ACGCTGAAAG TGATGCTGCG CCAGATTGGA GTAATTGGTC ACGTATCCCA
ACCGCTGCTA CCTGTGGTAG CTGTCACAGC ACAGTGGACT TTGCCGCAGG TAAAGGCCAT
TCACAACAGC TTGATAACTC AAACTGTATC GCCTGTCATA ACAGTGCTTG GACCGCTGAA
CTTCATACGG TGAAAACCGC TAATAAGAAA GTTTTAATCA ACAAATATGG GATTGAAACA
AGCTCAATTG TAAATCCAGA AACTAAAGCA GCGACAATAA GCATACAAGT GACTGATAGT
AAAGGTGCTC CTGTTGATAT TACTGCCTTA CTACCTCAGA TCCAACGTGT TGAAATTATT
ACTAACGTTG GCCCCAATAA CATCACTTTG AGTTATTTCA CTAAAGATTC AGTCATAGCG
GTTAAAAATG GTGTGCTTGA TTCTAACGCA AGTATTGTTG ACGGTAAGCT GCTTTACACT
ACTACTAAAC CACTGCCTTT TGGTGCTGCA AAAACAGATA CTGACACCTC TGTCACTTTT
GTAAACTGGG CTATGTGCTC TCTAAATGGT CAATTTGTAA CATGTGCAGA ACCAACATTT
GATGGTGCTG ATGTTAGTAA ATACACATCC ATGAAAGCAG ATATCGCCTT TGCAACATTA
TCTGGTGAAA AACCAAGTAC TCGCCACGTG GATTCAGTAA ACTTTAGTAC TTGTGCTAAT
TGCCATGGTA CAGAGTGGGA GTCTCGATAT CACAAAGGTA AAAACAGCCC AGGTTTCGTG
ATGTCAGAGC AACTTGCTCA TAGTAAGGAC GCCGCAGGTA AACCGATTGT TGGTCTTGAT
GGTTGTGCGA CTTGCCATAC TCCACATGGT ACTTACGCAA GTGGTGCTAA CAAAGGTGCA
TTGGAGATGA AATTACACGT TGTTCACGGT AAACAAGGTG TCATCAAAGA ATGTACTCAA
TGTCATAACG ACTTCAACCT CGATTCATTC AAGGTCAAAG GCGCTCTGGC AACTGCTGCG
GGTAAATACA CCACACCAAT CACAGCCACT TGTATTTCAT GCCATACGCC AGAATCCATT
GGCCACGGCT TAGAAAATAT GGGCGCGATT GTGAACGGTG ATTACACCCA AGCCAACCAG
GCAGTGCAGT CAGAAACCTG TTTCTACTGT CATAAACCCA CTCCAACAGA TCACACTCAA
GTGAAAATGT AA
 
Protein sequence
MMNAYKSKIA LLLAASAVSM ALVGCGGSDG NDGNPGETGG EPAGAIQTLN FNFEKALIKD 
GLPSLQFRVT NEDDMPVVGL QYFKFYAEQL VPQGATGAGD ASKWQYLIDE TCDLTPAVKK
CTGTLVDHKN GTYSYDFGTN LKTSTRATYN GELAQRIVLN NYVRGSTPAP LPDGTTLPVF
TGIFDYMADT GADATYSRKI VATESCNTCH DKVINAKHYT NDVNFCASCH TPGRVKAGNE
FNVLVHAKHK DLTLNALDSC QSCHAESDAA PDWSNWSRIP TAATCGSCHS TVDFAAGKGH
SQQLDNSNCI ACHNSAWTAE LHTVKTANKK VLINKYGIET SSIVNPETKA ATISIQVTDS
KGAPVDITAL LPQIQRVEII TNVGPNNITL SYFTKDSVIA VKNGVLDSNA SIVDGKLLYT
TTKPLPFGAA KTDTDTSVTF VNWAMCSLNG QFVTCAEPTF DGADVSKYTS MKADIAFATL
SGEKPSTRHV DSVNFSTCAN CHGTEWESRY HKGKNSPGFV MSEQLAHSKD AAGKPIVGLD
GCATCHTPHG TYASGANKGA LEMKLHVVHG KQGVIKECTQ CHNDFNLDSF KVKGALATAA
GKYTTPITAT CISCHTPESI GHGLENMGAI VNGDYTQANQ AVQSETCFYC HKPTPTDHTQ
VKM