Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1458 |
Symbol | |
ID | 5079610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1659685 |
End bp | 1659987 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498587 |
Product | branched-chain amino acid transport |
Protein accession | YP_001182982 |
Protein GI | 146292558 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTGGT TAATGATCTT TTCAATGGCG GCGGTTGTGT TTATCAGTCG TCATTTACTA CTTGAGCCTA AACTACCACT GCGATTAAGT AAGGGCACCC AAACCTTTTT AAGTTACTCA GCCCCAGCGG TACTCACTGC AATCTTTGCA CCCATAGTGT TTGTGCAAGA AGGTCTGCTC GATCTGAGCC TAGATAACAG CTATCTCATC TGCGCCATAG TCGCTACAGT GTTGGCGCTC GTCACCCGTA ATACCTTGCT GACCACAGTG CTAAGTATGG GACTATTTTT CTTTATCCAT TAG
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Protein sequence | MIWLMIFSMA AVVFISRHLL LEPKLPLRLS KGTQTFLSYS APAVLTAIFA PIVFVQEGLL DLSLDNSYLI CAIVATVLAL VTRNTLLTTV LSMGLFFFIH
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