Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1438 |
Symbol | |
ID | 5079688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1634393 |
End bp | 1636015 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498567 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001182962 |
Protein GI | 146292538 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGAA AACTAAAAAT CGGCAAACGC TTAAGCGTTG CCTTTGGCAT TATGACGTTG CTCACGGTTT TAGTGGGACT TACCGCCATT CAGCGCTTTA ACAGTGTTGA AGTCAATATC AGTAATATCG CAGAGCATCG ACTCCCAGCT TCGTTATTAG CTGGTGAACT CAACAAAGAT TTTCTATTTA TTAGGCTGTA TACACTTAAT TTAATGTATG CGGAAACGGA TGCTGAACGG CAACGTCATC GCGATCGCAT CCGTAATGAG CTGGATAACT TTAAAACCAA TATTGATAAA GTAGAGGTGT TTCAACGTAC GCCAGAAGGG CACAAGGTAC TAGAGCAGGT ATTAAAGGCC AAAGACGGCT ACGATCAACT GCATCAACAG ATCCTGAGAT TAAACGAGCA ACGCCAATAT ACCGAGTCTA TTGCATTGCG TAATGCAGGG TTAAATGATG CCGCTATTAA AGTATCAAAT GCGATAAGTG CCTTAGCAGA TTACCAGCAA GAAAGATCCT TAGTGGAAGC AAACAGTGCA AAACACACGA TAGAATTAGC ACTTAGTACT ATGATTGCTA TTGTGGTTTT TGCGGTTATC GGAGCCGTTG TGCTGGCTTA TTTCTTTAGC CGCAGTCTCA TTGGCCCTAT GCAAAATGCC GTAGCCATCT GTCAGCGTAT TGCCAGTGGC GATTTAACCC AAAAGTTTGC CGATGATGCC GCGGACGAAG CTGGGGATAT GATCCGCAGC ATGGCTGTTA TGCAACAGCA ATTGCAGCAA ACACTAAGTG AAATTAATCA CTCATCTTCG CAATTGGCCG CGACCTCTGA AGAGCTTAGC GTCGTTACCG ATCAATCTAG CCAGACATTA CACCAGCAAA GTCAAGAACT CGAATTAGCA GCGACGGCGG TGACTGAATT AACGACAGCC ATTGAAGAAG TTGCCCGCAG TGCCAGTGCA ACATCGAGTG ACTCTGAAAC CGCAAATATT AAAGCTCGTC AAGGCAAAGA GCGTGTTCAG CATACTATTC AAACCATACA AACCCTTGAA GGTGAATTAC AACAAGCCCG TCAGGGAATT CAGCAATTAG CGAGTCGGGT AAACGAAATC AGTTCAGTAT TGGATGTGAT TAGAGGCATT GCCGAACAAA CTAACTTGTT GGCATTGAAT GCTGCTATTG AAGCTGCCAG AGCAGGTGAA AGTGGTCGAG GTTTTGCCGT AGTTGCCGAT GAGGTGCGCG CATTGGCACA TCGTACACAG GAATCAACCA AAGAAATTGA GCGTATGATG CATTTAGTGC AAGCTGAAAC TCAGACTACC GTTAACACCA TGCAAAATAG TAGCAATCGT GCCACTGAAA CCTTGCTTAT TGCCCAGCAG GCAGGTGATG CCTTACAACA GATTGCCACC GCTATTGCTC AAATTAATGA ACAAAATCTT ACCATTGCCA GTGCAGCAGA AGAGCAGGCG ACAGTGGCGC GGGAGGTTGA TGGCAACCTT TTGAATATAC GAGATTTGTC ACATCAAACT TCTGCGGGGG CCCATGAAAC TCAAGCATCA AGTGCCGATC TTGCTCGTTT AGCAGAAACC TTAAATTCGC TGGTAACGTC TTTTAAAGTT TAG
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Protein sequence | MLRKLKIGKR LSVAFGIMTL LTVLVGLTAI QRFNSVEVNI SNIAEHRLPA SLLAGELNKD FLFIRLYTLN LMYAETDAER QRHRDRIRNE LDNFKTNIDK VEVFQRTPEG HKVLEQVLKA KDGYDQLHQQ ILRLNEQRQY TESIALRNAG LNDAAIKVSN AISALADYQQ ERSLVEANSA KHTIELALST MIAIVVFAVI GAVVLAYFFS RSLIGPMQNA VAICQRIASG DLTQKFADDA ADEAGDMIRS MAVMQQQLQQ TLSEINHSSS QLAATSEELS VVTDQSSQTL HQQSQELELA ATAVTELTTA IEEVARSASA TSSDSETANI KARQGKERVQ HTIQTIQTLE GELQQARQGI QQLASRVNEI SSVLDVIRGI AEQTNLLALN AAIEAARAGE SGRGFAVVAD EVRALAHRTQ ESTKEIERMM HLVQAETQTT VNTMQNSSNR ATETLLIAQQ AGDALQQIAT AIAQINEQNL TIASAAEEQA TVAREVDGNL LNIRDLSHQT SAGAHETQAS SADLARLAET LNSLVTSFKV
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