| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1393 |
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| Symbol | |
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| ID | 5080588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1581048 |
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| End bp | 1581791 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498524 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001182919 |
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| Protein GI | 146292495 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0083444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CAACTGCAAT CATTGTGGGC GCTAGCTCAC ATTTGAGCCG TGAACTTGCA
AAACAGTTGG CTGAACAGCA GGTTGAATTA GCCTTGTTTG CTCAAGATCC CGAATCATTA
CGTGAGTTTG CCTCATCCTT GCCCACAAAA GTACAAGTAT TTGCGCTGCA GATAGAGCAA
CCACAAGCCA TTATTAGTCA ACTTGAAAGT GTGTGGCAAA ATCTAGGTGG AGCACACTTA
GTCTTAGTTA GTACAGGCCT TAATAGCTAC GATCCCGCGT TACCATGGTT ACCAGAGCAA
GATATTATCG ACGTAAATGT GCGTGGTTTT GCCGCGATCT GCAATACGGC ATTTAGACTA
TTTCGTGAAC AGGGTTATGG CCAATTGGCA GCAATTAACT CTATTGCAGG CCTGCGCGGT
GGACCAAGCG TGGCTTATCA CGCCTCAAAA GCCTTTGCAC AGAACTACCT TGAGGGCTTA
AGTATGCATG CCCAGCGCCT TAAGTTACCC ATTACCATCA CCGATATCCA ACTCGGTCTA
CTCGATAAAG CTGCGATGCA GCAAAGTGCG ATGTGGCTTG CCCCATTGCC ACAAGTCGCA
GCGCAAATCA TCAAGGCAAT GAAACAAGGT AAACGTCGTG TCTATGTCAC CAAACGCTGG
CGCCTTGTCG CTTGGTTAAC TAAGATTTTG CCCGAGTTTA TCTACAACAC TCGCCATTGG
AAGGCTAAAA AGCCTAAGCA TTAA
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| Protein sequence | MTQATAIIVG ASSHLSRELA KQLAEQQVEL ALFAQDPESL REFASSLPTK VQVFALQIEQ
PQAIISQLES VWQNLGGAHL VLVSTGLNSY DPALPWLPEQ DIIDVNVRGF AAICNTAFRL
FREQGYGQLA AINSIAGLRG GPSVAYHASK AFAQNYLEGL SMHAQRLKLP ITITDIQLGL
LDKAAMQQSA MWLAPLPQVA AQIIKAMKQG KRRVYVTKRW RLVAWLTKIL PEFIYNTRHW
KAKKPKH
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