| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1388 |
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| Symbol | |
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| ID | 5080583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1575624 |
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| End bp | 1577162 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498519 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001182914 |
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| Protein GI | 146292490 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGG AAGTCAGTTG TCAAGATCGC GTGGGTTTAG CGAAAGATAT TTTAGTCGTG
TTAGAACGCT ATGGTATTAA TTTGATTGCC ATAGATGCCA GTAACCAAGG CTTTTTGTAC
CTACAGTTTG CTGAAATCAG TTTTGAAACC TTAAGTGCTT TGATGCCACA AATTCGCAAA
GTGGAAAGTG TTCACGATGT GCGTACCGTG TCGTTTATGC CATCAGAACA AGAACATTAC
GCCCTAAAAA CCCTTCTAAA AACATTACCC GATTCCGTAT TCTCCATTGA TGTCAAAGCC
CGTATTCGTA TTGTAAATGA GTCTGCGTTA TTGAATATTG GTATGGGGGA GCATGAAGTA
CTTGATGAGT CATTAAATCA TTGGGTACAA GGTTTCAACT TCAGCCGTTG GTTAAGTGAA
AGCCAAGTAT TGCCGCAAGC GGCACGGGTA CAAATTGGCC CGAATGAGTA TCTTGCCGAA
ATGCTGCCTA TCTATCTGCC TGATGACGAT GATAAAACCA TCCTTGTGGG TGCAGTGGTA
TCACTAAAAT CTCCCGCACG TGTCGGTAAA CAATTTAATG CATTGCAAAA TCAAACAATG
GGTTTTGAAA ATGTGTTAGC CAGCAGTGAC AAAATGAAAG AGGTACTTAA GCAAGCGCGG
CGTATGGCAC AGCTTGATGC GCCGTTATTG ATAACGGGAG AAACGGGGAC TGGTAAAGAA
TTAATGGCTA GAGCGAGTCA CGATGCCAGC ATGCGTCGCG AAAAACCGTT TATTGCCATT
AACTGCGCAG CTTTACCCGA CAGCGCCGCT GAAGAAGAAT TATTTGGTTA TGTCAGTCAG
GGCAAAGTCG TCAAAAGAGG ATTCTTTGAG GAAGCTAAGG GGGGCACAGT ATTTCTCGAT
GAAGTGGCGG AAATGTCTAA GGCTGCTCAA GTTAAGCTGC TTCGGCTATT GCAAGATGGC
ACTTTTAGAC GTATTGGCGG TGATGAAGAA GTCCGTGCGG ATGTGCGGAT TATCTGCTCT
ACCCAGAAAA ATTTAGCCGA ACTGTGCCAA ACCGGTGAGT TTAGGGAAGA TTTGTATTAT
CGCATCCATG TACTGAGCTA CCACATTCCC TCATTACGCG AACGCAAGGT GGATATTATC
CCGTTAACTG AAATGTTCCT TGAACATTAT AGCCAACAGT TATCGAGCCC TGTGCGCCGC
ATCTCGGCCC AGTGCCGCGA TCATTTGCTC ACCTACGCTT GGCCGGGTAA CGTGCGTCAA
TTAAAGAATG CCGTATTTAG AGCGGTGTCA ATGTGGGATG GTTCGGCCGA GTTGACGGTG
GAACAGCTTA AATTGCCTTC CTACGCCGAA GGTTTTGGTT ACTTTGATAA TGAATTTGAA
GGTAATCTCG ATGATGCAAT GAAGCAGTTT GAGGCGAGTC TATTGCGCCG ATTATATCCG
GCCTATCCGA GCACTCGCCA GTTGGCGAAA AAGCTCGGTG TGTCACACAC TGCTATTGCC
AATAAACTGC GTGAATACAA AATAACCAAG CGTCGTTAG
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| Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKA RIRIVNESAL LNIGMGEHEV
LDESLNHWVQ GFNFSRWLSE SQVLPQAARV QIGPNEYLAE MLPIYLPDDD DKTILVGAVV
SLKSPARVGK QFNALQNQTM GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVVKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDNEFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKITK RR
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