Gene Sputcn32_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1364 
Symbol 
ID5080559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1547735 
End bp1549132 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content45% 
IMG OID640498496 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001182891 
Protein GI146292467 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCC CCGATCTCTG TACCCATGTC AGTGTTTTTT TAGACTCGCT TAAATTGAAA 
GCGGGTAGAA AGCTAGTGCT GGCTTACAGT GGTGGTGTTG ATTCAGAAGT CCTTGCCTAT
TGCCTTAGCA AGTATGCTAA ACAGTATGGG GAGCTTCAAT ATCAACTTGT TTATGTGCAC
CATGGTTTGA GTCAACATGC CGATGCTTGG GCACAGCATT GCATTACACG GGGACAACAT
TATGGTCTAC CCACGATAAT TGAGCATGTT CAAGTGAAGC AGGGTCCAAG GATGAGTATT
GAGGCTGAAG CTCGCAGGAT GCGTTATCAG GCAATTGAGC AGCATGTAGG TTCAGATGAT
CTGCTGCTTA CCGCGCACCA TGAGGACGAT CAACTCGAGA CGATTCTACT CGCCCTTAAA
CGTGGTCAAG GCCCAAAAGG ATTAGCGGCG ATGGGACAGA TCCAGCCGTT AATGCAGGGC
ATTCAAGTGC GACCTTTATT GGATGTGAGC CGTGAGCATA TTGAGGCTTA TGCGAGTGCT
AATGGATTGG TGCATATCGA AGATGAAAGT AATCAGGATG ACAAGTATGA TCGTAATTTT
TTACGTTTAG ACATTATTCC TCGCCTTAAG GCTCGTTGGT CAAGTATTGC CACAACAGCG
AGTCGCAGTG CTTTCCTATG CGCTGAGCAA CAAACTGTCA TTGATACAGA GGTCAGCCTC
CGTTTACCCA CTTGGCTCAC GCAAGCAAAA TTTACCCAAC AGACGGTATT TAACCTCAAT
GGATTTGACT CTTTGACACC AAGCTGGCAA GCGCTATTAC TGCGTGGATT TATCGAGTCG
CAGGGGTTTG CATTACCCTC TTTTGTGCAA CTTAATCAAA TTATTCATCA GTTACTTAAT
GCAAAAGATG ATGCTAAAGT GCTTATTCGT GTGGGCGATT GTGCGTTGCG CCGTTTTGCC
AATCAACTTT ATCTTGAGCA TTATTCCAAG CATGTAAAAT CATCAACTGA ATATGCCAAG
AAGTGTATTG ATATTTCCGA AAGCAGCCTA AGCATGCTCA TCAATGGTGA TATTGAAACC
TTAGTCATCC CAGATCCCCA AGGTAGAAAT ATTCAATTTG GATTAAGTCA ACAAGGACCA
AGACTCAAGC TTCCGCCAGT GAATACTGTG GTGAGTGTAC GTTATCAATT ACCAGGGCAG
CTTCGTTGCC ATCCCCACAA TCGCAGTAAA GGACGTGAAC TTAAAAAACT TTGGCAGGAA
TACGCAGTGC CGCCATGGTT ACGAGGGCAA GTGGGGTTTG TATTTTATGG CGAGCAGATG
GTCATGGCAC TCGATCTTTG GATTGAAAAG GCATTTTGTG TAGAGGATGA GGCTGTTGGG
TTGCTGCAGC ACCAATGA
 
Protein sequence
MSVPDLCTHV SVFLDSLKLK AGRKLVLAYS GGVDSEVLAY CLSKYAKQYG ELQYQLVYVH 
HGLSQHADAW AQHCITRGQH YGLPTIIEHV QVKQGPRMSI EAEARRMRYQ AIEQHVGSDD
LLLTAHHEDD QLETILLALK RGQGPKGLAA MGQIQPLMQG IQVRPLLDVS REHIEAYASA
NGLVHIEDES NQDDKYDRNF LRLDIIPRLK ARWSSIATTA SRSAFLCAEQ QTVIDTEVSL
RLPTWLTQAK FTQQTVFNLN GFDSLTPSWQ ALLLRGFIES QGFALPSFVQ LNQIIHQLLN
AKDDAKVLIR VGDCALRRFA NQLYLEHYSK HVKSSTEYAK KCIDISESSL SMLINGDIET
LVIPDPQGRN IQFGLSQQGP RLKLPPVNTV VSVRYQLPGQ LRCHPHNRSK GRELKKLWQE
YAVPPWLRGQ VGFVFYGEQM VMALDLWIEK AFCVEDEAVG LLQHQ