Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1364 |
Symbol | |
ID | 5080559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1547735 |
End bp | 1549132 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498496 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001182891 |
Protein GI | 146292467 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTCC CCGATCTCTG TACCCATGTC AGTGTTTTTT TAGACTCGCT TAAATTGAAA GCGGGTAGAA AGCTAGTGCT GGCTTACAGT GGTGGTGTTG ATTCAGAAGT CCTTGCCTAT TGCCTTAGCA AGTATGCTAA ACAGTATGGG GAGCTTCAAT ATCAACTTGT TTATGTGCAC CATGGTTTGA GTCAACATGC CGATGCTTGG GCACAGCATT GCATTACACG GGGACAACAT TATGGTCTAC CCACGATAAT TGAGCATGTT CAAGTGAAGC AGGGTCCAAG GATGAGTATT GAGGCTGAAG CTCGCAGGAT GCGTTATCAG GCAATTGAGC AGCATGTAGG TTCAGATGAT CTGCTGCTTA CCGCGCACCA TGAGGACGAT CAACTCGAGA CGATTCTACT CGCCCTTAAA CGTGGTCAAG GCCCAAAAGG ATTAGCGGCG ATGGGACAGA TCCAGCCGTT AATGCAGGGC ATTCAAGTGC GACCTTTATT GGATGTGAGC CGTGAGCATA TTGAGGCTTA TGCGAGTGCT AATGGATTGG TGCATATCGA AGATGAAAGT AATCAGGATG ACAAGTATGA TCGTAATTTT TTACGTTTAG ACATTATTCC TCGCCTTAAG GCTCGTTGGT CAAGTATTGC CACAACAGCG AGTCGCAGTG CTTTCCTATG CGCTGAGCAA CAAACTGTCA TTGATACAGA GGTCAGCCTC CGTTTACCCA CTTGGCTCAC GCAAGCAAAA TTTACCCAAC AGACGGTATT TAACCTCAAT GGATTTGACT CTTTGACACC AAGCTGGCAA GCGCTATTAC TGCGTGGATT TATCGAGTCG CAGGGGTTTG CATTACCCTC TTTTGTGCAA CTTAATCAAA TTATTCATCA GTTACTTAAT GCAAAAGATG ATGCTAAAGT GCTTATTCGT GTGGGCGATT GTGCGTTGCG CCGTTTTGCC AATCAACTTT ATCTTGAGCA TTATTCCAAG CATGTAAAAT CATCAACTGA ATATGCCAAG AAGTGTATTG ATATTTCCGA AAGCAGCCTA AGCATGCTCA TCAATGGTGA TATTGAAACC TTAGTCATCC CAGATCCCCA AGGTAGAAAT ATTCAATTTG GATTAAGTCA ACAAGGACCA AGACTCAAGC TTCCGCCAGT GAATACTGTG GTGAGTGTAC GTTATCAATT ACCAGGGCAG CTTCGTTGCC ATCCCCACAA TCGCAGTAAA GGACGTGAAC TTAAAAAACT TTGGCAGGAA TACGCAGTGC CGCCATGGTT ACGAGGGCAA GTGGGGTTTG TATTTTATGG CGAGCAGATG GTCATGGCAC TCGATCTTTG GATTGAAAAG GCATTTTGTG TAGAGGATGA GGCTGTTGGG TTGCTGCAGC ACCAATGA
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Protein sequence | MSVPDLCTHV SVFLDSLKLK AGRKLVLAYS GGVDSEVLAY CLSKYAKQYG ELQYQLVYVH HGLSQHADAW AQHCITRGQH YGLPTIIEHV QVKQGPRMSI EAEARRMRYQ AIEQHVGSDD LLLTAHHEDD QLETILLALK RGQGPKGLAA MGQIQPLMQG IQVRPLLDVS REHIEAYASA NGLVHIEDES NQDDKYDRNF LRLDIIPRLK ARWSSIATTA SRSAFLCAEQ QTVIDTEVSL RLPTWLTQAK FTQQTVFNLN GFDSLTPSWQ ALLLRGFIES QGFALPSFVQ LNQIIHQLLN AKDDAKVLIR VGDCALRRFA NQLYLEHYSK HVKSSTEYAK KCIDISESSL SMLINGDIET LVIPDPQGRN IQFGLSQQGP RLKLPPVNTV VSVRYQLPGQ LRCHPHNRSK GRELKKLWQE YAVPPWLRGQ VGFVFYGEQM VMALDLWIEK AFCVEDEAVG LLQHQ
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