| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1355 |
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| Symbol | |
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| ID | 5080550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1535441 |
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| End bp | 1536811 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498487 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_001182882 |
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| Protein GI | 146292458 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000225455 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATT TTTTATGGAA CTTAGGTTCT TTTATCGTGG CGTTGGGGTT GTTAATTACC
GCCCACGAAT ACGGTCATTT CTATGTCGCG CGTCGCTGCG GCGTTAAAGT CGAGCGTTTC
TCTATTGGTT TTGGCAAGGC CATTTGGCGC CGTATGGGTA AAGATGGCAC TGAATATGTG
GTCGCCATGA TCCCCCTCGG TGGTTACGTC AAAATGCTCG ATGAGCGTGT CGAAGATGTG
CCTGACGAGC TAAAACATCA GGCGTTTAAT CGTAAAACGG TATGGCAACG TATTGCGATT
GTTGCCGCAG GCCCGATAGC CAACTTTATT TTTGCTATTA TCGCATTGTA TTTTATGTAC
TTGATTGGTG TGCCATCACT TAAACCGGTG ATCACTTCTA CGATTCCAGG AACTGCTGCT
GCGCAAATTC AAGTCACTGA ACCTATGCAA GTGACGGCAA TATCAGGTCA GCGTGTGCGC
AATTGGGAAG AGGTGAATCT TGCGCTTGTT GGTCATATTG GTGATCCCAG CTTGAGTGTT
TCCCTTGCGC CATTAAATAG TTTGCAGGGG TTTGAGTCAA ATGCCAGAAC CTATACGTTA
GATACACGCC AATGGCGCTT TGATCCTGAA AAGGAATCAC CGATAACCAC CTTAGGGTTA
GGGATTTATC GTCCAGAGAT TGAACCTAAG GTTGCCTTAA TCAGTGAAGG AAGTGCTGCA
GCAAATAGTG AGTTAAAGGT TGGCGATACG CTCGTTGCTA TCAATGATGA ACCTTATACC
GATTGGCAGG CTTTTGTTGA CATTATTCAA CATTCTGCCA ATGTGCCTGT GAGTATAATG
GTGCGTCGCG ATGGCGAACA GTTTGTGGTT ACTGTGACGC CGACAAGTAC AAAAAATGCT
GAAGGTAAAG AGATTGGGGT ACTAGGTGTC AGCCCCGCAC AGGCACAATG GCCTGAGAAT
ATGCGTTTAC AACTAGAATA TGGGCCAATC GATTCTTTTG CTATTGCTGC AGATAAAACA
TGGCAACTTG TTGCAGTCAG CTTTAAGATG ATTGGCAAAT TATTTACCGG CGATGTGTCG
GTGAAAAACC TGAGTGGACC CATCTCGATA GCACAGGGTG CGGGCAGTAG TGCAAACTAT
GGCTTGGTCT ATTTTCTCGG GTTCCTCGCG CTCATCAGCG TCAATTTAGG CATCATTAAC
TTGCTGCCTT TACCTGTGCT CGATGGGGGA CACCTGCTGT ATTACTTTAT TGAAGTAATA
ACTGGTAAAC CTGTGCCTGA AAAGGTGCAG GAAATAGGAT TCAGATTTGG GGCAGCAATA
CTGCTGATGT TGATGAGCAT TGCGCTTTTC AATGATTTTG CCCGACTCTG A
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| Protein sequence | MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKAIWR RMGKDGTEYV
VAMIPLGGYV KMLDERVEDV PDELKHQAFN RKTVWQRIAI VAAGPIANFI FAIIALYFMY
LIGVPSLKPV ITSTIPGTAA AQIQVTEPMQ VTAISGQRVR NWEEVNLALV GHIGDPSLSV
SLAPLNSLQG FESNARTYTL DTRQWRFDPE KESPITTLGL GIYRPEIEPK VALISEGSAA
ANSELKVGDT LVAINDEPYT DWQAFVDIIQ HSANVPVSIM VRRDGEQFVV TVTPTSTKNA
EGKEIGVLGV SPAQAQWPEN MRLQLEYGPI DSFAIAADKT WQLVAVSFKM IGKLFTGDVS
VKNLSGPISI AQGAGSSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFIEVI
TGKPVPEKVQ EIGFRFGAAI LLMLMSIALF NDFARL
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