Gene Sputcn32_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1349 
Symboltsf 
ID5080976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1530179 
End bp1531030 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID640498481 
Productelongation factor Ts 
Protein accessionYP_001182876 
Protein GI146292452 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.81434e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT CTGCTGCCCA AGTTAAAGAA CTGCGTGATC GTACTGGCGC AGGCATGATG 
GATTGTAAAA AAGCCTTAGA AGAAACCAAC GGCGACATGG AGTTAGCAAT TGACAACATG
CGTAAGTCTG GTGCTGCTAA AGCTGCTAAA AAGGCGGGTA ACATCGCTGC TGACGGTACT
ATCCTGATCA AAAATGGCGA AGGTTTCGCT GTTCTGTTAG AAGTAAACTG TCAAACTGAC
TTCGTTGCTA AAGACGCTAA CTTCTTAGGT TTTGCTAACT CAGTATTAGA CGTTGCCGCA
GCGTCTAAAG TGGCTTTAGA AGACTTAAAA GCACAGTTCG AAGAAGCACG TGTTGCGTTA
GTTGCTAAAA TCGGTGAAAA CATCAACGTT CGTCGGGTTG AGTACATCGA TGGTGCTAAA
TTAGCGTCTT ACCGTCACGG TGAGCGTATC GGTGTGGTTG TAACCGGTGA CGCAGATGAC
GAAACGCTGA AGCACATCGC TATGCACGTT GCCGCTTCTA AGCCAGAATA CGTTAACCCA
GAAGACGTTC CTGCTGACGT AGTTGCTCGT GAACAAGCAC TGCAAATCGA AATCTCTATG
AATGAAGGCA AACCTGCTGA CATCGCAGAG AAAATGGTTG TGGGTCGTAT GAAGAAGTTC
ACCGGTGAGA TCTCTCTGAC TGGTCAAGCT TACATCATGG AACCAAAGAA AACTGTTGGC
GAATTCTTGA AAGAGAAAGG CGCTAAAGTC ACTAACTTCA TTCGTTTAGA AGTGGGTGAA
GGTATTGAGA AGAAAGAAGA AGATTTCGCA GCAGAAGTTG CTGCTCAAAT CGCTGCTTCT
AAAAAGGCTT AA
 
Protein sequence
MAISAAQVKE LRDRTGAGMM DCKKALEETN GDMELAIDNM RKSGAAKAAK KAGNIAADGT 
ILIKNGEGFA VLLEVNCQTD FVAKDANFLG FANSVLDVAA ASKVALEDLK AQFEEARVAL
VAKIGENINV RRVEYIDGAK LASYRHGERI GVVVTGDADD ETLKHIAMHV AASKPEYVNP
EDVPADVVAR EQALQIEISM NEGKPADIAE KMVVGRMKKF TGEISLTGQA YIMEPKKTVG
EFLKEKGAKV TNFIRLEVGE GIEKKEEDFA AEVAAQIAAS KKA