Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1349 |
Symbol | tsf |
ID | 5080976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1530179 |
End bp | 1531030 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498481 |
Product | elongation factor Ts |
Protein accession | YP_001182876 |
Protein GI | 146292452 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000281434 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTT CTGCTGCCCA AGTTAAAGAA CTGCGTGATC GTACTGGCGC AGGCATGATG GATTGTAAAA AAGCCTTAGA AGAAACCAAC GGCGACATGG AGTTAGCAAT TGACAACATG CGTAAGTCTG GTGCTGCTAA AGCTGCTAAA AAGGCGGGTA ACATCGCTGC TGACGGTACT ATCCTGATCA AAAATGGCGA AGGTTTCGCT GTTCTGTTAG AAGTAAACTG TCAAACTGAC TTCGTTGCTA AAGACGCTAA CTTCTTAGGT TTTGCTAACT CAGTATTAGA CGTTGCCGCA GCGTCTAAAG TGGCTTTAGA AGACTTAAAA GCACAGTTCG AAGAAGCACG TGTTGCGTTA GTTGCTAAAA TCGGTGAAAA CATCAACGTT CGTCGGGTTG AGTACATCGA TGGTGCTAAA TTAGCGTCTT ACCGTCACGG TGAGCGTATC GGTGTGGTTG TAACCGGTGA CGCAGATGAC GAAACGCTGA AGCACATCGC TATGCACGTT GCCGCTTCTA AGCCAGAATA CGTTAACCCA GAAGACGTTC CTGCTGACGT AGTTGCTCGT GAACAAGCAC TGCAAATCGA AATCTCTATG AATGAAGGCA AACCTGCTGA CATCGCAGAG AAAATGGTTG TGGGTCGTAT GAAGAAGTTC ACCGGTGAGA TCTCTCTGAC TGGTCAAGCT TACATCATGG AACCAAAGAA AACTGTTGGC GAATTCTTGA AAGAGAAAGG CGCTAAAGTC ACTAACTTCA TTCGTTTAGA AGTGGGTGAA GGTATTGAGA AGAAAGAAGA AGATTTCGCA GCAGAAGTTG CTGCTCAAAT CGCTGCTTCT AAAAAGGCTT AA
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Protein sequence | MAISAAQVKE LRDRTGAGMM DCKKALEETN GDMELAIDNM RKSGAAKAAK KAGNIAADGT ILIKNGEGFA VLLEVNCQTD FVAKDANFLG FANSVLDVAA ASKVALEDLK AQFEEARVAL VAKIGENINV RRVEYIDGAK LASYRHGERI GVVVTGDADD ETLKHIAMHV AASKPEYVNP EDVPADVVAR EQALQIEISM NEGKPADIAE KMVVGRMKKF TGEISLTGQA YIMEPKKTVG EFLKEKGAKV TNFIRLEVGE GIEKKEEDFA AEVAAQIAAS KKA
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