Gene Sputcn32_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1348 
SymbolrpsB 
ID5080975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1529330 
End bp1530058 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content47% 
IMG OID640498480 
Product30S ribosomal protein S2 
Protein accessionYP_001182875 
Protein GI146292451 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.64287e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAG TTTCAATGCG CGATATGCTC CAGGCCGGTG TCCACTTCGG TCACCAAACC 
CGTTACTGGA ACCCAAAAAT GAAGCCATTC ATTTTCGGTG CTCGCAACGG CGTCCACATC
ATCAACCTAG AGCATACTGT GCCAATGTTC AATGAAGCCC TTGCTTTCAT CAGCAACGTT
GCTTCAAAGA AAGGTAAAGT ATTATTCGTT GGTACTAAAC GTGCTGCTGG CGAAGCGATC
AAAGAAGCCG CAATCTCTTG TGATCAGTAC TATGTCGATC ACCGCTGGTT AGGCGGTATG
CTGACTAACT GGAAAACCGT TCGTCAGTCA ATCAAACGTC TGAAAGAACT GGAAAGCCAA
TCAGTAGATG GTACTTTCGA CAAGCTGACC AAGAAAGAAG CGCTGATGCG TACTCGTGAG
CTTGAAAAGC TGGAAAAATC TTTAGGCGGT ATTAAAAACA TGGGCGGCCT GCCAGACGTA
TTATTCGTTA TCGGCGCTGA CCATGAGCAT ATCGCTATTA AAGAAGCTAA CAACCTGGGT
ATCCCTGTTG TTGCAGTTGT TGATACTAAC TCTGCGCCAG ATGGTGTTAA CTACATCGTT
CCTGGTAACG ACGACGCGAT GCGTGCTATT CGCCTGTACA CTACTTCTGT AGCTGCTGCT
GCTAAAGCTG GCCGTGGCCA AGATCTGGCT GTTCAAGCTG AGCAAGATGG TTTCGTAGAA
GCCGAATAA
 
Protein sequence
MTTVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNGVHI INLEHTVPMF NEALAFISNV 
ASKKGKVLFV GTKRAAGEAI KEAAISCDQY YVDHRWLGGM LTNWKTVRQS IKRLKELESQ
SVDGTFDKLT KKEALMRTRE LEKLEKSLGG IKNMGGLPDV LFVIGADHEH IAIKEANNLG
IPVVAVVDTN SAPDGVNYIV PGNDDAMRAI RLYTTSVAAA AKAGRGQDLA VQAEQDGFVE
AE