| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1320 |
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| Symbol | |
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| ID | 5080947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1488056 |
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| End bp | 1489738 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498452 |
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| Product | hypothetical protein |
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| Protein accession | YP_001182847 |
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| Protein GI | 146292423 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
[COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACGA AGATCCACAT CAAATATTTG TACACAGCAG GTGCCATGCT ATTCGCCTAT
TTGGCGGTGG CAGGAACTTC TCCTCTGCTT ACGTTCATTT GGGCATGGAC GAGCCTGTCA
CTGTTTTTAG TCGGCTCAGC CTATTGGTTT AATCGCGCCA GTATTTTTAG AAAACGCCAA
GATGGCACTA TTCCTTGGTA TATTCGCTGG GGTTTTATCC CTTTTTTATT GGGTTGCCGA
CTCTATAACC ATTGGGCGAG AAAATGTGAT TCAGTGCCAT CGATGCAGAG GATAGATGAA
CATCTGTATC TCGGTTGTCG ACTCTTTCCT GCGGATCTGG AAAAGATTAA AGCCAATAAG
ATCACTGCCA TTCTGGATGT CACCGCTGAG TTTGATGGCT TAGATTGGTC ACAGTTTGAA
GATCATATTG AGTATTTAAA TATTCCCATC TTAGATCATA GTGTGCCGAC CAGTGCCCAA
CTCAATCAAG CCGTTAACTG GCTGCACCGC CAAGTGCGCG CCAATAAAAA GGTACTCATC
CACTGTGCTA TGGGTCGTGG CCGCTCAGTG CTGGTACTCG CCGCTTATTT GGTTTGTAAA
GATAAACAAC AGCACTTCGT AGAAGTACTG CAACAGATAA AGCAAGTTCG CAAAACCGCA
GGCTTAAACA AATGGCAATT ACGCGCGCTT GAGCGCATGC TCAGTCAAGG GAAAATTAAC
ATCCACAAAG TAGCATGGAT TATCGCCAAC CCAGTCTCTG GCGGCGGAAA ATGGCAAGAA
TACAGCGAAC AAATCCAAGA TGAACTCAAA GCCTATTTTG ACCTGACGTT AACTCTCACA
ACAGCAGACG AAACCGCAAA TATCTTCGCT CAACAGGCCC GCAGTGCAGG CGCAGATATC
GTTATCGCCT GTGGCGGAGA CGGTACGGTA ACCGAGGTCG CATCAGAAGT TGTGAATACC
GATATCATGT TAGGGATTAT TCCTTTAGGA ACGACGAACG CCTTAAGTCA TGCGCTATTT
GGTTTAGGCA GCAAGATAAT TCCTATCTCT CAGGCGCTGG ATAATATTAT TCAAGGACAC
ACCCAAGCTA TAGATACCGC ACGTTGTAAT GATGAGTTAG TGTTGTTACT TGTCGGCATT
GGATTTGAGC AAAAAATGAT TGAATCAGCA AACCGCGAGC GTAAAAACGC CCTAGGTCAA
CTGGCCTACC TCGATGGTCT ATGGCAAGCG ATGAGTATGG CAGAAACCTT AACTATCTCG
TTAAGTTTGG ACGATGCCGC GCCGATAACG ATCCGTACCC ACAGCTTAGT AATTGCCAAT
GCCGCCCCCT TTACCAGTTT GCTAGCACAA GGAAATGGCG AACCCAATAT GACCGATGGA
TTGCTCGATA TTACCTGGTT GGATGCGGAC GATGACCCCA AAGGCCCCTT GCTTGGCTTA
GCCGAATTAG CAATCGCTGG GTGGGTAAAA GAAGGCCATA AAGATCTAAA AGTTCAACAA
GCTCGCCTAA GTAAAGTCCA CCACGCCCAC GCTAAAAAGG TCACCATTCG CAGTCAGCCT
AAGTGTAAAT ATGTGATTGA TGGCGAAGTG TTTGAGCCTG CGGATCTTAC CATTGAGGTT
CAACCCGCAT CCCTTAAGGT GTTTGTTCCC TATCAAGAAA TAACCGAAGA AACAACCTTG
TAA
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| Protein sequence | MLTKIHIKYL YTAGAMLFAY LAVAGTSPLL TFIWAWTSLS LFLVGSAYWF NRASIFRKRQ
DGTIPWYIRW GFIPFLLGCR LYNHWARKCD SVPSMQRIDE HLYLGCRLFP ADLEKIKANK
ITAILDVTAE FDGLDWSQFE DHIEYLNIPI LDHSVPTSAQ LNQAVNWLHR QVRANKKVLI
HCAMGRGRSV LVLAAYLVCK DKQQHFVEVL QQIKQVRKTA GLNKWQLRAL ERMLSQGKIN
IHKVAWIIAN PVSGGGKWQE YSEQIQDELK AYFDLTLTLT TADETANIFA QQARSAGADI
VIACGGDGTV TEVASEVVNT DIMLGIIPLG TTNALSHALF GLGSKIIPIS QALDNIIQGH
TQAIDTARCN DELVLLLVGI GFEQKMIESA NRERKNALGQ LAYLDGLWQA MSMAETLTIS
LSLDDAAPIT IRTHSLVIAN AAPFTSLLAQ GNGEPNMTDG LLDITWLDAD DDPKGPLLGL
AELAIAGWVK EGHKDLKVQQ ARLSKVHHAH AKKVTIRSQP KCKYVIDGEV FEPADLTIEV
QPASLKVFVP YQEITEETTL
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