Gene Sputcn32_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1285 
Symbol 
ID5081012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1444638 
End bp1445723 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content46% 
IMG OID640498417 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_001182812 
Protein GI146292388 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000107001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACC TATTTTTATT TTGCCGCGCA GGTTTTGAAA AAGAATGCGC TGCAGAAATC 
CAACAGCGAG CCGGTGAGCT CAATGTGGGT GGCTTTGTTA AAGCCAACAA TAACGACGCT
TATGTTGTAT ACCAATGTTT TGAAGAAGAC GCTGCCGATA CATTAGTCAA ACAATTACCT
TTAGATTCGC TCATTTTCGC CCGCCAGATG TTTGCTGCTA GCGACTTGTT AGTCGACTTG
CCTGAAAGTG ACAGAATAAG CCCAATCGTT GCGGCGCTCA GTGACGTCAG CAAAGCGGGT
GAAGTGCGGG TTGAAACACC TGATACGAAC GAAGCGAAAG AGCTATCGGC TTTTTGCCGT
AAGTTCACCG TGCCGTTACG CCAGCATTTG AAAAAATCAG GTAGTTTGCT TGCGCAGGAA
AATCCCAAAC GTCCGATTAT CCACGTGTGT TTTATTGGAC CCGGCCGTGC CTATGTGGGT
TATTCCTATA GCAATAACAG TTCGCCACAT TTTATGGGCA TTCCACGTCT TAAAATGGCG
GCGGATGCAC CGAGTCGTTC TAGTTTGAAA CTCGACGAAG CCTTTGGGCA GTTTGTGCCT
AAAGAAGAGC AGGAAGAACG TATTCGCAGT GGCATGAATG CAGTGGATTT GGGCGCTTGC
CCAGGGGGAT GGACTTACCA ATTGGTTCGC CGTGGTATGT TTGTGTCAGC GGTTGATAAT
GGTCCCATGG ATGAAAAACT GATGGAAACG GGCCAAGTGA AACATTACCG TGAAGACGGT
TTCCGTTTCG AACCGCAGCG CAAAAATATC TATTGGTTAG TGTGTGATAT GGTTGAGAAA
CCTGCGCGCG TTGCTGAACT GATTGAAGCT TGGGCGATTA ACGGTTGGTT TAAGGAAGCG
ATTTTTAACC TTAAATTACC GATGAAGAGC CGCTATAAAG AAGTGACAGC CATTCTTGAG
ACCATGCAGA CGATTCTTAA AGAGAATGGT GTGACTGATT TTAAAGTGCA GTGTAAGCAT
CTTTATCACG ACCGTGATGA AGTGACAGTG CATTTATGGC TACGTCCTAA TACCGCGTGG
AATTAA
 
Protein sequence
MKNLFLFCRA GFEKECAAEI QQRAGELNVG GFVKANNNDA YVVYQCFEED AADTLVKQLP 
LDSLIFARQM FAASDLLVDL PESDRISPIV AALSDVSKAG EVRVETPDTN EAKELSAFCR
KFTVPLRQHL KKSGSLLAQE NPKRPIIHVC FIGPGRAYVG YSYSNNSSPH FMGIPRLKMA
ADAPSRSSLK LDEAFGQFVP KEEQEERIRS GMNAVDLGAC PGGWTYQLVR RGMFVSAVDN
GPMDEKLMET GQVKHYREDG FRFEPQRKNI YWLVCDMVEK PARVAELIEA WAINGWFKEA
IFNLKLPMKS RYKEVTAILE TMQTILKENG VTDFKVQCKH LYHDRDEVTV HLWLRPNTAW
N