Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1284 |
Symbol | |
ID | 5081011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1444068 |
End bp | 1444460 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498416 |
Product | hypothetical protein |
Protein accession | YP_001182811 |
Protein GI | 146292387 |
COG category | [S] Function unknown |
COG ID | [COG2363] Uncharacterized small membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00814173 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAG GTTTATTGTT ACTCGCCGCC GTAAGCGGAT TCTTAGCCGT CGCCTTAGGG GCTTTTGGTG CCCATGGTTT AAAAGCGGTC GCGCCACCAA ACTTAATCGA AGTCTTTAAC TTAGGTGTGC AATATCATTT CTACCATACC TTTGCCCTCA TCATGGTTGC CTTCTCGGGC CAATGGTTAA CCTCGCGTTT ACTGGACTGG TCGGCATATC TCTTTGTCGC AGGCATAGTA CTATTTTCGG GTTCACTATA TGGACTGGCC TTGTTTGGGA CTAAGTGGTT AGGTCCTATT ACGCCTATGG GTGGTGGTTG TTTTTTACTC GGTTGGTTAT TATTTGCCGC CGCGGTATGG CGTCACAAAG TTATCGACGG TCACGAGTCT TAA
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Protein sequence | MRKGLLLLAA VSGFLAVALG AFGAHGLKAV APPNLIEVFN LGVQYHFYHT FALIMVAFSG QWLTSRLLDW SAYLFVAGIV LFSGSLYGLA LFGTKWLGPI TPMGGGCFLL GWLLFAAAVW RHKVIDGHES
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