Gene Sputcn32_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1274 
Symbol 
ID5081001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1434555 
End bp1435175 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content46% 
IMG OID640498406 
Productheat shock protein GrpE 
Protein accessionYP_001182801 
Protein GI146292377 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.25429e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG AATCGATTAA AGCAGAACAG GATCTGATCC AAGAGGGTGT AGAGTCTGAA 
GTATCTACCG CAGAAGCAAG TCTTGTTGAT GAGCTTACCC AGGCCAATTT CCGTATTGAA
GAGTTGGAAC AGTTACTCGC TGACGCTTTG GCGAAAGTTG AAGAGCAGAA AGATTCCGTC
ATCCGCGCCG CCGCCGAGGT CGATAATATT CGTCGCCGTG CCGCCATGGA TGTGGAAAAG
GCCAATAAAT TTGCATTGGA AAAGTTCGCC AATGAATTGT TACCAGTGCT TGATAATATG
GAGCGCGCTC TGATGGGGAC AAACCCAGAA GATGAAGCGA CTAAAGCAAT TTATCAAGGC
GTTGAGTTAA CGCAAAAAAG CTTACTTACT GCAGTGGCTA AATTTGGTGT TAAACAAATT
GATCCACAAG GAGAGTCATT TAACCCTGAT CAACATCAAG CCATTGGCAT GCAGCCAAGT
GCGGATTTTC CTGCAAATAC AGTGATGTTA GTGATGCAAA AGGGCTACGA GCTAAATAGT
CGTTTACTGC GTCCTGCTAT GGTAATGGTA TCGCAGGGCG GCCCTAGCCA AGAAACGGCG
ACCATTGATA TTGAGGCGTA A
 
Protein sequence
MSNESIKAEQ DLIQEGVESE VSTAEASLVD ELTQANFRIE ELEQLLADAL AKVEEQKDSV 
IRAAAEVDNI RRRAAMDVEK ANKFALEKFA NELLPVLDNM ERALMGTNPE DEATKAIYQG
VELTQKSLLT AVAKFGVKQI DPQGESFNPD QHQAIGMQPS ADFPANTVML VMQKGYELNS
RLLRPAMVMV SQGGPSQETA TIDIEA