Gene Sputcn32_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1259 
Symbol 
ID5080986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1414742 
End bp1416091 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content45% 
IMG OID640498391 
Productmulti anti extrusion protein MatE 
Protein accessionYP_001182786 
Protein GI146292362 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAG TATCCCTACC CCAGACGGAT CAACATTTAC TCCAAGAGCC GATTTCTAAG 
CTTTTTTGGC GTTATACCAT ACCCACCATT GCCTCCATGT TGGTAACGGG CGTGTATGTG
ACTATTGATG GGATTTTCGT GGGGCACTAT TTAGGTGAAG CGGGGCTAGC AGGGATGATG
TTAGCTTACC CAGTCGGGGC CATTTTATAT GCCATCGGCG CTATGATAGG CATGGGTAGT
GCAGCATTAG TGTCAATCAA TCTTGGTCAA GGTAACGTGG TTAAAGCCCG CAAACTCTTG
GGTAATGCCT TTAGTTTGTG TTTATTGGCA GGTGGATTTT TTGCCCTTAT GGGCGGATTA
TTTTCACGGG ATATTTTAAT TGCCCTTGGT GCACAAGGGG ATATCCTCGA AAATGCCAAT
CAATATTTAT TCTGGTATTT CGCCCTGTGC CATTTCCCCA TCATCTCAAT GGCCTTTACC
ACACTTTTAC GTAATGATGG TCGGCCATCT ATGGTGACCT TTGTGTTAAT TTTAGGGGGG
GTACTCAACA CTTTCTTAGA TTGGTTATTT ATCGTGGTAT TTCCCTTTGG TTTGGCGGGC
GCCGCGATTG CGACCATGTT AGCGCAGGCT GTGACGGGCT TACTGTGTTT ACAGCATTTT
TTTGGTTCTC GTACCCAGCT TAAAATCAAC TTAGAGCAAA TGAAGCTTAA GTTTGATAAT
TGTGTGAATA TTGCCCGCGT GGGTTTACCT AGCTTTTTGA TGAACCTTTA TTTATCAATT
GTGCTCACTC TGCACAACAC GGCATTTTTA TGGGTTGGTG GGCCATTGCA CGTGGCGGCC
TACGGGGTGG TGAGTTACAC CGAAGCATTT TTCTATCTGA TTTTTGAGGG CATAGCCCTT
GGCACTCAAC CTATCTATAG CTTCAACGCG GGTGCAGGGC GTTTTGACAG AGTTAAACAA
GCGCGCAATA TCGCCTTTAC GATGACATTA CTTACAGCAG CCTTAGGGCT TGCCTTGATT
TACTCTCGCC CTGAGTGGTT AGTGTATTTA TTTGCCGGTG ATAACCCGAA CCTAACACCT
GTGGCGATTG AAGGCATGCG TTGGTATTTC TGGGGCTTAC CTATGGAAGG GTTAATCTTA
GTTGGGGCAA GTTTTTTCCA AGCCATTAAT TGTTCAAAAC AGGCGTCTAT CTTGACTGGC
ACTAAACTTG TCCTGATCGC GGCCATTATT TACTGTTTTG CTTGGGCATT TGGGGTTATA
GGGGTTTGGA TATCGCTCGC GACTTGCAGT ACTTTGCTGA CCCTATGGAT GTTCTATGCA
ATGAAGAAGG TGGATAACCG TTTACCTTAG
 
Protein sequence
MTAVSLPQTD QHLLQEPISK LFWRYTIPTI ASMLVTGVYV TIDGIFVGHY LGEAGLAGMM 
LAYPVGAILY AIGAMIGMGS AALVSINLGQ GNVVKARKLL GNAFSLCLLA GGFFALMGGL
FSRDILIALG AQGDILENAN QYLFWYFALC HFPIISMAFT TLLRNDGRPS MVTFVLILGG
VLNTFLDWLF IVVFPFGLAG AAIATMLAQA VTGLLCLQHF FGSRTQLKIN LEQMKLKFDN
CVNIARVGLP SFLMNLYLSI VLTLHNTAFL WVGGPLHVAA YGVVSYTEAF FYLIFEGIAL
GTQPIYSFNA GAGRFDRVKQ ARNIAFTMTL LTAALGLALI YSRPEWLVYL FAGDNPNLTP
VAIEGMRWYF WGLPMEGLIL VGASFFQAIN CSKQASILTG TKLVLIAAII YCFAWAFGVI
GVWISLATCS TLLTLWMFYA MKKVDNRLP