| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1248 |
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| Symbol | |
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| ID | 5081560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1395170 |
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| End bp | 1397407 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498380 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001182775 |
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| Protein GI | 146292351 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTC AAGCCAATAC TTACTTCTAT AACGGTGCCG ATGTGGCGCT GCTCAACGGT
CAATATACGG ACGTATTTTC ACTCTTAGGC ATGCACACTT CTGAAGATGG AAAATCGTTA
ATTGTTAGGT GTTTTTTACG CAATGCGTTC AAGGTTGATG TGATTAGCAT TAAAGATGGT
CGTAGGGTAG CGGGTCTTGA GAAGGTCAAT GATGCGGGCT TGTTTGCAGG TACTATGGGG
CGGCGAGTTA AGCCATTTCT GTACTTGTTG CGAATACAAT ATCCGCTAAG CCAAATAGAA
ATTGTCGATC CCTATCAGTT TGGTCCTTTA CTCAATGCCG ATGATTTATA TCTGTTTGGT
GAAGGGAGTG CAGAGCGAGC ATACAAATTT TTAGGAGCGA ACTGGCGCGA TGTTGAAGGT
ATTGAAGGAG TACATTTTTG TGTATGGGCG CCTAATGCTA AACGGGTTTC TGTGGTCGGT
GATTTTAACC ACTGGGATGA TACTCAGCAT GTGATGCGCC AACATATGGC CAATGGTTTG
TGGGAGATTT TTCTGCCCAA CGTGGCGGAA GGTGCGCACT ACAAATTTGA TTTGGTCCAC
CCAAATGGAG AACGCCACGC AAAATCGGAT CCAATGGCGA CTCAAATGGA GTGTGCGCCG
CATAATGCGT CTATTGTTCC TAAAAAATCC AAACACAGTT GGAAAGATAC ATTATGGATG
AACAAGCGAG CAGTAACGGC GTGGCATAAA GCCCCCATGG CGATTTATGA AGTTCACTTA
GGTTCATGGC GACGTAAGGG CGATAATGGT GAGCAATATC TTGATTATCA AGATCTAATT
GAACAACTTA TTCCCTATGT CAAAGCCCAA GGTTTCACCC ATATTGAATT AATGCCCATC
AGTGAATATC CCTTCGATGG CTCATGGGGA TATCAGCCAG TAGGTCTATA TGCCCCGACC
CATAGATTTG GTGATGCTAA CGGCCTTAAG GCATTTGTGG ATGCCTGCCA TCAGGCGGAT
ATCGGTGTGG TTCTCGATTG GGTTGCGGCA CATTTCCCTA AGGATCCCCA CGGCCTAGTG
CGTTTTGATG GTACTTGTTT GTATGAACAT GAAGATCCGC GCAAGGGCAC GCATCCTGAC
TGGGACACGT TAATTTACAA CTATGGGCGT GGCGAAGTGC GTAGCTTTTT ACTGAGCAAT
GCATGCTATT GGCTACGTGA GTTTCATTTT GATGGTTTGA GGATCGATGC GGTATCGTCG
ATGTTGTACC TTGATTACAG CCGTGAGCCG GGTCAATGGC TACCGAATGC CTATGGTGGT
CGAGAAAACC TCGAAGCCAT CAGTTTTCTG CAAATGCTGA ATCAACGCTT GTATCAAGCC
TTTCCCGGTA TTTGCATGAT AGCCGAAGAG TCCACCGCCT TTGCGGGCGT CACAAAACCG
ACAGATCATC ATGGTTTGGG CTTTGGTTTT AAATGGAATA TGGGGTGGAT GAATGACAGC
TTAAGTTACT TAAGCCGTGA TCCCATTTAT CGTCAATACC ATCATCATCA ACTGACCTTC
AGTTTAATGT ATGCCTATAC CGAGCAATTT ATGTTGTCGG TGAGCCATGA TGAGGTGGTC
CATGGCAAGG GCTCACTATT GCATAAAATT CCCGGTGACG ATTGGCAAAA ATTTGCTACT
TTGCGCGCTT ATTACGGTTT TATGTGGGGG CATCCCGGTA AGAAGTTGCT GTTCATGGGC
AGTGAATTTG CTCAGCGGGA TGAGTGGGAT CATAACCACA GCTTGGATTG GCATTTATTA
GCGTTTGAAC CACACCAAGG GGTGCAACGC TGGCTTAAGG ATCTGAATCA GTTATACCAA
GGCATGTCTG CGTTATCAGT GCTTGACTAT CAACCCGCAG GCTTTCGTTG GCTTGACTGC
GATAATGGCA GTGCCAGTAT TTTTACCTTT GTGCGCTATG GCCTTGCGGG GGATGCACCC
CTCGTCTTTG TCATCAATAT GACACCCAGT GTTCATCATG GATTTCGTAT CGGTTTACCC
CAAGCGGGGG ATTTTTGTGA GTACCTCAAT AGCGATAGCT ATCTTTATTG TGGTAGCAAC
CAAGGTAATG CAGGTCTTGT GGTTGCCCAA AACCAACCAT GGCAGGGGAT GGAGTCGAGT
GCACTTATTA CGGTACCACC CCTTAGCTGT TTAGTCCTTG GCCTTGCAGC CAATCAGGTT
GAGGCTAAAA GAAGATGA
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| Protein sequence | MMTQANTYFY NGADVALLNG QYTDVFSLLG MHTSEDGKSL IVRCFLRNAF KVDVISIKDG
RRVAGLEKVN DAGLFAGTMG RRVKPFLYLL RIQYPLSQIE IVDPYQFGPL LNADDLYLFG
EGSAERAYKF LGANWRDVEG IEGVHFCVWA PNAKRVSVVG DFNHWDDTQH VMRQHMANGL
WEIFLPNVAE GAHYKFDLVH PNGERHAKSD PMATQMECAP HNASIVPKKS KHSWKDTLWM
NKRAVTAWHK APMAIYEVHL GSWRRKGDNG EQYLDYQDLI EQLIPYVKAQ GFTHIELMPI
SEYPFDGSWG YQPVGLYAPT HRFGDANGLK AFVDACHQAD IGVVLDWVAA HFPKDPHGLV
RFDGTCLYEH EDPRKGTHPD WDTLIYNYGR GEVRSFLLSN ACYWLREFHF DGLRIDAVSS
MLYLDYSREP GQWLPNAYGG RENLEAISFL QMLNQRLYQA FPGICMIAEE STAFAGVTKP
TDHHGLGFGF KWNMGWMNDS LSYLSRDPIY RQYHHHQLTF SLMYAYTEQF MLSVSHDEVV
HGKGSLLHKI PGDDWQKFAT LRAYYGFMWG HPGKKLLFMG SEFAQRDEWD HNHSLDWHLL
AFEPHQGVQR WLKDLNQLYQ GMSALSVLDY QPAGFRWLDC DNGSASIFTF VRYGLAGDAP
LVFVINMTPS VHHGFRIGLP QAGDFCEYLN SDSYLYCGSN QGNAGLVVAQ NQPWQGMESS
ALITVPPLSC LVLGLAANQV EAKRR
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