| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1237 |
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| Symbol | |
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| ID | 5081549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1379302 |
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| End bp | 1381746 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498369 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001182764 |
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| Protein GI | 146292340 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.115199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAT TCCGTTTGTC ACTAACTGCA CTCGCCTGCC TTTCCGCTTT ATCACAAACG
TCATACGCTG AAGCTAACTC GGTATCAGCC AATTCTGAAG CCAACATTGA GCGCATCACA
GTTTATGGCA GACAGAACTC AGTGGTGAAA AATTCGGGGT TAGCGACTAA ATCCGACATG
TCTCTCATGG AAACCCCTGC TGCGGTTGTG ATTGTTGACC AAGATCTGAT CGAAACCCAA
GGTACAGATA ATCTGCAGGA TTTGATCCGT AATATTAGTG GCGTAACTCA AGCGGGTAAT
AACTACGGTA TTGGTGACAA CATAGTCATC CGTGGCTTAG GGGCTAATTA CACCTATGAT
GGTATGTATG GTGGCGCAGG CCTTGGAAAT ACTTTTAATC CAACACGTTC ATTAACAAAT
GTCGAATCTG TTGAGGTACT AAAAGGACCT GCTACAGGGC TTTATGGTAT GGGCAGTGCT
GGTGGCGTTA TCAATCTTAT TGAAAAGAAA CCGCAATTCG AGTCAAAAAA CAAATTTATC
GCCGAAGTTG GTCAATGGGA TACCTACTCA CTCGCACTCG ATAGCACTGG GGGATTAACA
AATGATGTCG CTTACCGTTT AGTCGCTAAA ACCGCTCGCA GTGACGGTTA CCGTGATATA
GGCACAGATA GAGATGAAAT GTATGGCGCC TTGAAGTGGG TATTAACTGA TAGCCAAGAT
CTCATGCTTT CAGGTGCTTA CATTAAAGAC GCTATTGCAG TTGATTCTAT TGGCCATCCA
ATTCGAATTT ATAATGCTGA CTCGGTTGGT GGAAAAACGG CGGGAGAAGT CACTTGGCAA
GACTTAATTA ACGATCCTAG CGGTAAAGGT TTACAACTCA CCGATGAACA ACGCCAACAA
CTGGCCGCCT CTCTCTCGAG TGGTGATGGT CTAACGCCTT ATTCTTTTGG TGATGCAGGA
CTGATTTCAC CAATGGCAAA AGATAATGAA GGTGAAGAAT TAAGATTTAA GCTCACCCAT
AACATCTACT TCAACGACAA TCTCTTTTTG AATCAGCAAG TGCAGTATCG TGATTATACT
TCAGGCTTTG CTCGCCAAAC GGGTGCTTAT AACTATGTTT ATTGGAAGCA AGGAAAAAAC
CCAATAAACA CTGAGCCCCG CGCACCTTTG GTTGAGAATG GCGTACTTTA CCCCTTTGCC
GCCAGACGAC AGGAATACCG CAAAGTTGAT GCCGATGAAA CTTCGTGGCA GTACTTTGCC
GACCTACGTT ATGACTTCCA AATTGGCCAT ATAGACAACG AACTATTGAT CAATGCCAAC
TATGAAGATC GCAATATTCG CTTTAAGCAA TATTCAATCT ACGATGCAGA TCAAGTCTTT
AAAGACAAAG ATGGAAAAAT CACTTATCAA GGCTCTCTGC CTTATATTTA TGACATCCGT
CATCCGAATT GGGGCACAGG TAAATTTGAG GACTATGACC CACTAAAAAC CGCTAACTAT
AACAAGACTG TCAGTGCCTG GGGCTTGGGA TTACAACATG TTGGTTATTT AGGCTACGGT
TTTACGACCC GGATTGGCAT TGCCTTTAAT GAGATAAAAC AAAGTTATGA ACACTTAGGC
CTTGACCCTC GCTATAGCAT TAGCCAATCC CAAGCGACTC CAGAGGCCGA TACCACAGAT
AACGGCATGA CCTATAACTT AGGCTTGACC TACATGCCGA TAGAGGATCT ATCATTCTTT
ATCAATCACT CAAAGGGACG CACTGCCTAC AGTGTGCTCG ATGCAGTAAA AGATAATGCT
ACCAACCGAG ATGATTCTGA ATCAATTAGC AATGATTTAG GTATGCGCTT TAAGGCATTT
GAGGATCAAT TACTGGGCTC ACTAGTATTG TTTAAAAGCT CGCGCACTAA TGTCGCCTAT
AACAATCCTG ATTATACCAA TGGCATATTA ACCCCTAATA TTCCCGTGTA TTTTTACGAC
GGAAGTGAAG ATACTCAAGG AGTCGAACTC GATCTCAATG CCCACCTGAA TGATCAATGG
CGCGTTAACC TGAATGGAAT GTACCAAGAT GCAAGGGATA AGCAAAACCC GAATGACATC
GCAAATTACG ACAGCCGTCA AAAAGGTGTT CCCTATGTCA CCGCCAGTGC ATGGGTAACT
TATGGCGCAA ACTGGTTTGC ATTATCAAGC CCGATTGAAC TGAGTTTAGG TGCTAAATAT
GTGGATGATA GAAGTACACA CTCAAGTTCA TTTGGAATTC CTGATGGTTA TGTCCCTAGC
TATACCGTGA TGGATTCAGC AATAAGTTAC ACTGCTGACT CATGGAAAAT CCAATTTAAT
ATCAATAATC TATTCAATAA AGACTATTAC AATAAAGCGA TGTTCTTAGG AGGAATGCCG
GGTGAAGAGC GCAATGTGAA ACTGCAATAT AGCTATAGTT TCTAA
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| Protein sequence | MKSFRLSLTA LACLSALSQT SYAEANSVSA NSEANIERIT VYGRQNSVVK NSGLATKSDM
SLMETPAAVV IVDQDLIETQ GTDNLQDLIR NISGVTQAGN NYGIGDNIVI RGLGANYTYD
GMYGGAGLGN TFNPTRSLTN VESVEVLKGP ATGLYGMGSA GGVINLIEKK PQFESKNKFI
AEVGQWDTYS LALDSTGGLT NDVAYRLVAK TARSDGYRDI GTDRDEMYGA LKWVLTDSQD
LMLSGAYIKD AIAVDSIGHP IRIYNADSVG GKTAGEVTWQ DLINDPSGKG LQLTDEQRQQ
LAASLSSGDG LTPYSFGDAG LISPMAKDNE GEELRFKLTH NIYFNDNLFL NQQVQYRDYT
SGFARQTGAY NYVYWKQGKN PINTEPRAPL VENGVLYPFA ARRQEYRKVD ADETSWQYFA
DLRYDFQIGH IDNELLINAN YEDRNIRFKQ YSIYDADQVF KDKDGKITYQ GSLPYIYDIR
HPNWGTGKFE DYDPLKTANY NKTVSAWGLG LQHVGYLGYG FTTRIGIAFN EIKQSYEHLG
LDPRYSISQS QATPEADTTD NGMTYNLGLT YMPIEDLSFF INHSKGRTAY SVLDAVKDNA
TNRDDSESIS NDLGMRFKAF EDQLLGSLVL FKSSRTNVAY NNPDYTNGIL TPNIPVYFYD
GSEDTQGVEL DLNAHLNDQW RVNLNGMYQD ARDKQNPNDI ANYDSRQKGV PYVTASAWVT
YGANWFALSS PIELSLGAKY VDDRSTHSSS FGIPDGYVPS YTVMDSAISY TADSWKIQFN
INNLFNKDYY NKAMFLGGMP GEERNVKLQY SYSF
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