Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1208 |
Symbol | |
ID | 5081519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1353761 |
End bp | 1354444 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498339 |
Product | YheO domain-containing protein |
Protein accession | YP_001182735 |
Protein GI | 146292311 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGAAGC TGATAGATTT AACCCCAAAT GATTGGGACA TACTCAAATC CATCGAGAAT ATCGTTGATG GCATTGCCGC CATGTATGGC CAACATACTG AAGTGGTGCT GCACAGTTTG GATGCAAAAC ACCCGTCTGT AGTCAAAATT GCCAACGGCC ATATTACTGG ACGTGAAGTA GGTGCCCCCA TTACCAATCT TGCTTTGCTT AAACTTAAAG CGGGTCAGGA TATTTCCGAT GCTTACCTAA CAAAATGTGC CAATGGTAAG ACGCTCAGAT CCATCACCAC GGTTATCCGT AACAGTAAAA ATCAGCCAAT AGGGCTTTTA TGCATCAATA CCGATATGGA TGCCCCGCTG CAATCGGTAC TACGCACTAT GATGCCAGAA CACTTGTTTA ACCATGAACT CACCAGTTCA CCCGAGGTAT TTGCCCGTAA TATTGATGAA GCACTCCATA GCACTATCGA TAGTATTAAC CATGAAGTAC GTTCCAACCC TACCGTATCA ACTTCACAAA AAAGTCGCGA AATTGTCAAT CAACTCCATG AATTAGGGAT TTTCGAGCTT AAGGACAGCG CCCAAGTCGC GGCCACTCGA TTGGGTATTT CGGTGCATTC GATTTATCGC TATCTGCGGG AAATCAAAGC CAATCAAGCG GAAAGTGAGA AAAGCCTCGT CTAA
|
Protein sequence | MVKLIDLTPN DWDILKSIEN IVDGIAAMYG QHTEVVLHSL DAKHPSVVKI ANGHITGREV GAPITNLALL KLKAGQDISD AYLTKCANGK TLRSITTVIR NSKNQPIGLL CINTDMDAPL QSVLRTMMPE HLFNHELTSS PEVFARNIDE ALHSTIDSIN HEVRSNPTVS TSQKSREIVN QLHELGIFEL KDSAQVAATR LGISVHSIYR YLREIKANQA ESEKSLV
|
| |