Gene Sputcn32_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1170 
SymboltrmD 
ID5081580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1311125 
End bp1311871 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content50% 
IMG OID640498301 
ProducttRNA (guanine-N(1)-)-methyltransferase 
Protein accessionYP_001182697 
Protein GI146292273 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0336] tRNA-(guanine-N1)-methyltransferase 
TIGRFAM ID[TIGR00088] tRNA (guanine-N1)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.07568e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTAG GGGTAATAAC CCTGTTCCCA GAGATGTTTC GTGCCGTTAC AGACTTTGGT 
GTTACGGGTC GAGCCGTGAA AAACGGCCTG CTTGAGTTGC ACACGTGGAA TCCCCGTGAT
TTCACCCATG ATAGACATAA TACGGTAGAT GACAGGCCTT ACGGCGGTGG TCCCGGCATG
TTGATGATGG TGCAACCCTT ACGCGATGCC ATTCATGCTG CGAAAGCAGC TGCAGGCGAA
GAGGCAAAGG TGATTTATTT GTCACCTCAA GGACGCAAGC TGGATCAGCA AGGCGTGACT
GAGTTGGCTA AATCATCCCG GTTGATTTTG GTGTGTGGTC GGTACGAAGG TATTGATGAG
CGCATCATTC AAACGGAAGT GGATGAAGAA TGGTCGGTTG GGGATTACGT GCTTTCGGGC
GGCGAATTAC CTGCGATGAC CATGATAGAT GCAGTATCGA GATTGGTTCC TGGTGTGCTA
GGAAAACAAG CTTCGGCGGA GCAAGATTCT TTCTCCGACG GTTTACTGGA TTGTCCTCAT
TACACTCGCC CTGAAAGCCT TGATGGACTC GATGTACCCG CAGTGCTGCT AAGTGGCAAC
CACGAACAAA TTAGACTCTG GCGTTTACAG CAAAGCCTTG GTAGGACTTT ACTGCGACGA
CCAGAATTAT TGCAAAATCT AGCTCTGACT GACGAACAAT CGACTCTTTT AGCGCAGTTC
GTTGAAGCAA TGGACAAGCA TGCTTAG
 
Protein sequence
MWLGVITLFP EMFRAVTDFG VTGRAVKNGL LELHTWNPRD FTHDRHNTVD DRPYGGGPGM 
LMMVQPLRDA IHAAKAAAGE EAKVIYLSPQ GRKLDQQGVT ELAKSSRLIL VCGRYEGIDE
RIIQTEVDEE WSVGDYVLSG GELPAMTMID AVSRLVPGVL GKQASAEQDS FSDGLLDCPH
YTRPESLDGL DVPAVLLSGN HEQIRLWRLQ QSLGRTLLRR PELLQNLALT DEQSTLLAQF
VEAMDKHA