Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1167 |
Symbol | |
ID | 5081577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1308715 |
End bp | 1310088 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498298 |
Product | signal recognition particle protein |
Protein accession | YP_001182694 |
Protein GI | 146292270 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000256544 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAGA ACCTAACCGA CAGACTGTCA CGCACGCTGA AAAATATCAG TGGCCGTGGT CGCTTAACCG AAGAAAACGT TAAGGAAACC CTGCGCGAAG TGCGTATGGC ACTGCTGGAG GCGGATGTTG CCCTGCCTGT GGTGCGTGAA TTTGTTAACA ATGTGAAAGA ACGTGCCGTT GGCCAAGAAG TGGCTAAAAG CTTAAGCCCT GGTCAAGCCT TTATTAAGAT TGTTCAAAGC GAACTTGAAA AATCCATGGG CGAAGCGAAC GAAGCCCTCG ATTTAGCCAC TCAACCGCCA GCCGTATTAA TGATGGCGGG TCTGCAAGGT GCCGGTAAAA CGACTAGCGT CGCTAAGCTT GGTAAATTGC TGCGCACTCG CCATAAGAAA TCCGTATTAG TCGTTAGTGC AGACGTATAT CGTCCAGCAG CGATTAAGCA GCTTGAAACC TTAGCCGCTG AGGTCGATGT CGAGTTTTTC CCATCGGATG TGAGTCAAAA ACCGATAGAT ATTGCGAAAG CGGCTATTGC CCACGCAAAA CTGAAATTTA TTGATGTAGT GATCATCGAT ACGGCGGGTC GTCTACACGT CGACGAAGCC ATGATGGATG AGATCAAGGC ACTTCATGCT GCGGTTAAAC CTATCGAAAC ACTATTTGTT GTCGATGCGA TGACAGGGCA AGATGCGGCA AACACCGCAA AAGCCTTTAA TGAAGCTTTG CCATTGACTG GGGTTATCTT AACCAAAGTC GATGGTGATG CCCGCGGTGG TGCGGCGTTA TCGATTCGCC ACATTACGGG CAAGCCTATT AAATTCCTCG GTGTGGGTGA AAAGACAGAC GCGTTAGAGC CATTCCACCC AGACCGTATC GCTTCACGCA TTTTGGGCAT GGGCGATGTG TTATCGCTTA TAGAAGAAGT TGAACGTGGC GTCGATAAAG AAAAGGCCAT GAAACTCGCA TCGAAAGTGA AGCAAGGTGG CAGTTTCGAT TTAGAGGATT TCCGCGAACA GTTACAGCAA ATGAAAAACA TGGGCGGTAT GATGAACATG CTGGAAAAAC TGCCAGGTGT TGGTCAGTTG CCGCCTGAAG CCCTCGCGCA AATTCAAGAT GGCAAGATGA CCGGCCAAAT GGAAGCTATC ATTAATTCGA TGACTTCCAA GGAGCGTAAA AACCCTGATT TAATCAAGGG CTCACGCAAG CGTCGTATTG CTGCTGGTTC TGGCACGCAA ATTCAAGACG TAAACCGTTT ATTGAAACAG TTTACTCAAA TGCAAAAGAT GATGAAAAAA ATGTCGGCCA AGGGCGGCAT GCAAAAAATG ATGCGCGGAA TGCGTGGCAT GATGCCGGGC GGTATGAAAT TTCCAGGACG TTAA
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Protein sequence | MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV GQEVAKSLSP GQAFIKIVQS ELEKSMGEAN EALDLATQPP AVLMMAGLQG AGKTTSVAKL GKLLRTRHKK SVLVVSADVY RPAAIKQLET LAAEVDVEFF PSDVSQKPID IAKAAIAHAK LKFIDVVIID TAGRLHVDEA MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFNEAL PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV LSLIEEVERG VDKEKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMNM LEKLPGVGQL PPEALAQIQD GKMTGQMEAI INSMTSKERK NPDLIKGSRK RRIAAGSGTQ IQDVNRLLKQ FTQMQKMMKK MSAKGGMQKM MRGMRGMMPG GMKFPGR
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