| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1144 |
|---|
| Symbol | |
|---|
| ID | 5081654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1288377 |
|---|
| End bp | 1289177 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640498275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001182671 |
|---|
| Protein GI | 146292247 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.262413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAGTT TGTTAACAGT GTTCTTTATT TGCTTAGCTT TAGGTGCATT TGTCGGTTTT
ATGGCGGGGT TATTAGGGAT CGGTGGCGGT TTAATTGTTG TGCCAGCGCT ACTTTATATT
TTGCCATCAG TTGGGATTAG CTCATCTCAA TTGCCACATA TCGCTATTGC GACTTCATTG
GCCGCAATTA TTCTGACCTC CATTTCCTCC GCTAGAGCCC ATCATAAGCG TGGCAATATA
CCTTGGTCTT TATTTAAATC TATGCTGCCA GGGCTTGTGC TTGGAGCGCT TGCTTCTGGT
TTTATTGCTG AACGCATTCC CGCTGATACC CTGCAGCGAG GTTTTGCAAT CTTTGTGATT
TTAATGACAA TTCAGATGGT TTATCCGTTT AAGACTGAGT CGAATCGTCA GTTACCTAAT
GCTTTTGTGC TTTTTGTTGC ATCTGCTTTT ATTGCGGTAT TGGCAGGATT AACGGGAATC
GGCGGCGGTA TTCTGGTTGT ACCATTTTTG ACTTTTTATG GTTTACAGAT GCGTCAAGCT
GTTGGTTTTT CTGCTGCGAT GGGCTTCTTA ATCTCTCTTT CTGGCAGTTT TGGATATATT
ATCGCAGGGA TGGACGCTCC TGAATTACCT TATGGTACCG TTGGTTTTAT CTACTTACCC
GCCCTGTTTG GTTTAATTAT CACTTCTATT TTTATGGCGC CAGTAGGCGT AAAAGCCGCG
AGTACTTTGC CGACACCTGT ATTAAAAAAA ATATTTGCAC TCTTACTTTT GTGTGTTGGT
CTTAAGTTAA TTTTGGCCTA G
|
|---|
| Protein sequence | MDSLLTVFFI CLALGAFVGF MAGLLGIGGG LIVVPALLYI LPSVGISSSQ LPHIAIATSL
AAIILTSISS ARAHHKRGNI PWSLFKSMLP GLVLGALASG FIAERIPADT LQRGFAIFVI
LMTIQMVYPF KTESNRQLPN AFVLFVASAF IAVLAGLTGI GGGILVVPFL TFYGLQMRQA
VGFSAAMGFL ISLSGSFGYI IAGMDAPELP YGTVGFIYLP ALFGLIITSI FMAPVGVKAA
STLPTPVLKK IFALLLLCVG LKLILA
|
|---|
| |