Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1115 |
Symbol | |
ID | 5081625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1252995 |
End bp | 1254257 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498246 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001182642 |
Protein GI | 146292218 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.625307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACATA GGCGAAGTAA ATCCGTGAAA ATATACTTAG TCGGCGGCGC TGTACGTGAC AGCCTGCTCA ATCTCCCCAT TAAAGATAAA GACTATATGG TGGTTGGCGC GACACCAGAG CAAATGCTAC AACTGGGTTA CCGCCAAGTG GGTAAAGATT TTCCCGTATT CCTACATCCA ATAACACAGC AAGAATATGC GCTCGCCCGT ACTGAACGTA AAGTTGGGTT AGGCTATGGT GGTTTTAGTT GCTATGCCAG TCCCGATGTC ACACTTGAGC AAGACTTGCT CAGACGAGAT CTGACTATCA ATGCAATTGC ACAAGATGAA GAAGGCAACC TACATGATCC TTTCAATGGT ATTGGAGATC TTAACGCTCG CCTCTTGCGC CATGTCTCCG ATGCATTTAT TGAAGATCCA CTCAGAGTAT TACGTGTTGC AAGATTTGCC GCGCGGTTTC ATCACTTAGG CTTTCAAATA GCTGACAGCA CACTTCAGCT TATGCAGCAG ATCGCCCAAA GTGGAGAGTT AAACGCCTTA ACACCTGAAC GAGTCTGGCA GGAAGTTGAT AAAACCTTAA GTGGTTCAAA CCCCGAGGTT TTTTTTGAGG TATTACGTCA ATGTGGCGCA CTGAAAGTAC TTTTCCCAGA ACTTGATGCC TTATTTGGTA TCCCACAACC CGAAAAATGG CATCCAGAAA TCGATACAGG CCTGCACACC TTGATGGTAC TCGCCCAAGC CGCAATACTC ACGCAGGATA AAGCCGTTCG TTTTGCAGCA CTCGTTCACG ACCTAGGGAA GGCGATCACG CCCATAGAAC ATTTACCTAA ACATCATGGC CACGGACAAA AAGGATTACC AATAATCAAA GCTCTGTGTG AACGTTTACG TATTCCGAAT GAGTTCAGAG ATCTTGCATT AATTGTCAGT GATCAACATC AAAATGTGCA TCAAGCCTTC AAACTCAGAC CAGAAACAAT TATCAAGATA TTTGATAAAG CCGATTTTTG GCGCAAACCT GAACGTCTAA AACAACTCGT ACAGGCCTGT ATTGCAGATA TGCGCGGTCG TACAGGATTT GAACATCAGG ATTACCCGCA AGGTGAATAC TTTAGCCAAT GTTTTGCAGT CGCGAGTAAT GTCAATATTA AGGCAATTAT TCAAGCGGGC TTTAAAGGGG AGGAAATAAA GCAAATCCTC CACATGCATA GAATCGATGC CGTTGGTCAG TTAAAACGTG ATAAACAAAA TGCAGTGGAT TAG
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Protein sequence | MTHRRSKSVK IYLVGGAVRD SLLNLPIKDK DYMVVGATPE QMLQLGYRQV GKDFPVFLHP ITQQEYALAR TERKVGLGYG GFSCYASPDV TLEQDLLRRD LTINAIAQDE EGNLHDPFNG IGDLNARLLR HVSDAFIEDP LRVLRVARFA ARFHHLGFQI ADSTLQLMQQ IAQSGELNAL TPERVWQEVD KTLSGSNPEV FFEVLRQCGA LKVLFPELDA LFGIPQPEKW HPEIDTGLHT LMVLAQAAIL TQDKAVRFAA LVHDLGKAIT PIEHLPKHHG HGQKGLPIIK ALCERLRIPN EFRDLALIVS DQHQNVHQAF KLRPETIIKI FDKADFWRKP ERLKQLVQAC IADMRGRTGF EHQDYPQGEY FSQCFAVASN VNIKAIIQAG FKGEEIKQIL HMHRIDAVGQ LKRDKQNAVD
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