Gene Sputcn32_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1107 
SymbolrpsU 
ID5081617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1247168 
End bp1247383 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content45% 
IMG OID640498238 
Product30S ribosomal protein S21 
Protein accessionYP_001182634 
Protein GI146292210 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0828] Ribosomal protein S21 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.30678e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTA TTAAAGTACG TGAAAACGAA CCATTCGACG TAGCTCTACG TCGTTTCAAG 
CGCTCTTGTG AAAAAGCAGG TATTTTAGCT GACGTGCGTG CTCGTGAATT CTACGAGAAG
CCAACTACTG CACGTAAGCG CGCAAAAGCG GCTGCAGTTA AACGTTTAGC TAAAAAGCTT
TCTCGCGAAA ACGCACGTCG CGTACGTTTA TACTAA
 
Protein sequence
MPIIKVRENE PFDVALRRFK RSCEKAGILA DVRAREFYEK PTTARKRAKA AAVKRLAKKL 
SRENARRVRL Y