Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1087 |
Symbol | |
ID | 5081695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1220859 |
End bp | 1221272 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640498217 |
Product | rare lipoprotein A |
Protein accession | YP_001182614 |
Protein GI | 146292190 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.198857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCAC TTCAAAACCT AATTAGGCAG TTCAATGTCG TCAAACTATT TGCACTGGCA TTGCTAAGCT TTTTGGCTGG CTGTTCTTCG CTGCAGACTG GTGAAAATGG TAACTGGGTG GGATTTACCG AAACAGGTCA GGCTTCATTT TATGGGGATA AACATCAAAA TAAGCAGACG GCCAGTGGTG AACTTTACAA ACATAAATTA AAGACAGCAG CGCATAAAAA GTTACCCTTT GGCTCGAGTG TTAAGGTCAC CAATGTTAAG AATGGTAAAA GTGTCATTGT AAAAATCAAT GATAGAGGGC CTTTTGTGCG TGGCCGCATC ATTGATCTGT CAAAATCGGC TTTTAGCAGT ATAGGTAACA CATCTTCAGG TTTGATTGAC GTGAAAATTG AAGTTATTAA GTAG
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Protein sequence | MNALQNLIRQ FNVVKLFALA LLSFLAGCSS LQTGENGNWV GFTETGQASF YGDKHQNKQT ASGELYKHKL KTAAHKKLPF GSSVKVTNVK NGKSVIVKIN DRGPFVRGRI IDLSKSAFSS IGNTSSGLID VKIEVIK
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