Gene Sputcn32_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1087 
Symbol 
ID5081695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1220859 
End bp1221272 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content40% 
IMG OID640498217 
Productrare lipoprotein A 
Protein accessionYP_001182614 
Protein GI146292190 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.198857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCAC TTCAAAACCT AATTAGGCAG TTCAATGTCG TCAAACTATT TGCACTGGCA 
TTGCTAAGCT TTTTGGCTGG CTGTTCTTCG CTGCAGACTG GTGAAAATGG TAACTGGGTG
GGATTTACCG AAACAGGTCA GGCTTCATTT TATGGGGATA AACATCAAAA TAAGCAGACG
GCCAGTGGTG AACTTTACAA ACATAAATTA AAGACAGCAG CGCATAAAAA GTTACCCTTT
GGCTCGAGTG TTAAGGTCAC CAATGTTAAG AATGGTAAAA GTGTCATTGT AAAAATCAAT
GATAGAGGGC CTTTTGTGCG TGGCCGCATC ATTGATCTGT CAAAATCGGC TTTTAGCAGT
ATAGGTAACA CATCTTCAGG TTTGATTGAC GTGAAAATTG AAGTTATTAA GTAG
 
Protein sequence
MNALQNLIRQ FNVVKLFALA LLSFLAGCSS LQTGENGNWV GFTETGQASF YGDKHQNKQT 
ASGELYKHKL KTAAHKKLPF GSSVKVTNVK NGKSVIVKIN DRGPFVRGRI IDLSKSAFSS
IGNTSSGLID VKIEVIK