Gene Sputcn32_1067 details

Gene Information

• Locus tag: Sputcn32_1067
• ID: 5081675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1195180
• End bp: 1195572
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640498197
• Product: methylation site containing protein
• Protein accession: YP_001182594
• Protein GI: 146292170
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG CCAGAGGTTT TACGCTAATA GAGTTAATGA TTACCGTTGC GATAGTCGGA 
ATTCTAGCGG CGATTGCTTA TCCATCTTAT ATTGAATACG TTACTAAAAG TGGCCGTTCT 
GAAGGCGTTG CAGCAGTGAT GCGAGTTGCT AACTTACAGG AACAGTATTA CTTAGATAAT 
AAGGCTTATG CTACAGATAT GACTAAGTTA GGGTTATCTG CAAGCCCGTT CATCACTGAA 
CATGGACATT ATAGTCTCTC TTCTGAAGGG ACGAGTAGTT TTAAAATTAC GGCGACTGCG 
AAGGGAAGTC AGGCGAGTCG GGATTCTGTT TGTGCAACTA TCACATTAAC AGATATCGGT 
GTTAAAGGGC CATCTGAGGA GTGTTGGAAA TGA 

 

Protein sequence

MKIARGFTLI ELMITVAIVG ILAAIAYPSY IEYVTKSGRS EGVAAVMRVA NLQEQYYLDN 
KAYATDMTKL GLSASPFITE HGHYSLSSEG TSSFKITATA KGSQASRDSV CATITLTDIG 
VKGPSEECWK