Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1048 |
Symbol | pgi |
ID | 5081750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1170319 |
End bp | 1171956 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498178 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_001182575 |
Protein GI | 146292151 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000131328 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCT TGACCCAAAG CTCAACTTGG CAAGCTTTAT CAGCACACAC ACAAAACTTA CCCCATATGC GGGAATTATT TGCAACTGAT GCGGCACGTT TCAAAAATAT GTCACTATCG GCTTGTGGTT TGTTTCTCGA TTACTCAAAA AATAGAGCAA CGGCTGAAAC TCTTGAACTG TTATTTTCCT TAGCCAAAGA CAGTCAACTC GAAGCCAAGA TTAAGGCAAT GTTTGCCGGC GAGATAATAA ATACCACGGA AAAGCGCGCT GTATTGCATA CCGCGCTTCG CAGCAAAGCT AGTCAGTCAA TTATTGCCGA AGGCCAAGAT ATCGTCCTAG AGGTTCAGCA AACCTTGAGT AAAATGCAGG AATTTGTTGA AACAGTGACT TCTGGACAAT GGAAAGGATA CACAGGCAAA GCAATAACCG ATATTGTGAG TATCGGTATT GGGGGCTCTT TTCTTGGCCC TAAAGTGGTT TCTCAAGCCC TACGTCCATA CTGGAACCAA GGTTTAAATT GCCATTTTGT GGCAAACGTT GATGGCACTT CTATCAGTGA AAAACTGAAG TTGCTCGATT CTGAAACCAC ACTGTTTATC ATGTCTTCTA AGTCCTTTGG TACCCAAGAA ACACTGACAA ATACCTTAAC AGCCAAGGCC TGGTTTTTAG CTAAAGGCGG CTTACAATCC GATGTGGCTA AGCATTTTGT TGCAGTCACG TCAAACGTGA CTAAAGCAAC TGAGTTTGGT ATTGATGCCA ATAACATCTT CCCTATGTGG GACTGGGTTG GTGGCCGCTA CTCGCTTTGG TCTGCCATAG GTCTGCCTAT TGCATTATTG GTGGGTATGG ATAATTTCAG AGCCCTACTC AATGGTGCTC ACCAAATGGA TGAGCATTTT GCCAGTGCAC CCTTGGCAGA AAATATGCCC GTCATCATGG GACTACTGTC TCTATGGTAT GGTAATTTTT TTAATGCTCA ATCCCATGTG GTATTAACAT ACGATCACTA TCTACGTGGT CTACCAGCCT ACTTCCAACA ACTCGATATG GAAAGTAACG GCAAGTCAGT CACACTCGAT GGAACTGACG TTGATTACAG TACAGGTCCC GTAATTTGGG GAGGTGAAGG CACGAATGGT CAGCATGCCT ACCACCAACT CATCCACCAA GGTACAGCAT TGATCCCTGC CGACTTTATT ATGCCGCTGC AAAGCCATAA TCCCATTGGC GTACACCATG ATCAATTAGC ATCAAACTGC TTTGGACAAA CCCAAGCACT TATGCAAGGT AGAACCTTCG AGGAAGCGTT AGCCGAATTG GCGAATAGTT CGTTAACTGA TGAAGAAAAA CAGCTAATAG CAAAACATAA AGTGATGCCC GGAAACAAAC CAAGCAATAC TTTATTGATG AACAAGCTAA CGCCAGAAAC CTTAGGTGCG CTAATTGCGC TGTATGAACA CAGAACCTTT GTTCAAGGGG CAATATGGGA TATCAACTCC TTCGATCAAT GGGGAGTCGA GTTAGGTAAA AATCTCGGTA ACGATGTGCT CGCGAGGATC AGTGCTGAAC AAGATTCCAG CGCCTTAGAC GCTTCAAGTA ATGGACTGAT TAACTTGTAT CGACAAGGTG CAATTTAA
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Protein sequence | MTLLTQSSTW QALSAHTQNL PHMRELFATD AARFKNMSLS ACGLFLDYSK NRATAETLEL LFSLAKDSQL EAKIKAMFAG EIINTTEKRA VLHTALRSKA SQSIIAEGQD IVLEVQQTLS KMQEFVETVT SGQWKGYTGK AITDIVSIGI GGSFLGPKVV SQALRPYWNQ GLNCHFVANV DGTSISEKLK LLDSETTLFI MSSKSFGTQE TLTNTLTAKA WFLAKGGLQS DVAKHFVAVT SNVTKATEFG IDANNIFPMW DWVGGRYSLW SAIGLPIALL VGMDNFRALL NGAHQMDEHF ASAPLAENMP VIMGLLSLWY GNFFNAQSHV VLTYDHYLRG LPAYFQQLDM ESNGKSVTLD GTDVDYSTGP VIWGGEGTNG QHAYHQLIHQ GTALIPADFI MPLQSHNPIG VHHDQLASNC FGQTQALMQG RTFEEALAEL ANSSLTDEEK QLIAKHKVMP GNKPSNTLLM NKLTPETLGA LIALYEHRTF VQGAIWDINS FDQWGVELGK NLGNDVLARI SAEQDSSALD ASSNGLINLY RQGAI
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