| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1022 |
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| Symbol | |
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| ID | 5081721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1135345 |
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| End bp | 1136319 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498150 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001182550 |
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| Protein GI | 146292126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000246501 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAG AGATTAATCT AAAAAGCGAG ATTTCGGCAA CACAAACTGG CCTGAGATTA
GATCAGGCAC TAGCTGAGTT GTTCCCAGAT TACTCGCGCA CGCGCATCAA GGAATGGATC
CTATCTGATG CAGTTTATGT TGACGGGGTA ATTGTTAATA AGCCTCGCGA GAAAGTATTC
GAGCTACAAC AGATTGAAAT TGCTGCAACT CTTGAGGAAG AAGTGCATGC AGCAGCACAG
GCCATCGAGC TAAATATTGT CTATGAGGAC GATCATATCC TTGTTATCAA TAAGCAAGCA
GGATTAGTTG TGCACCCTGG TGCTGGTAAT GCTGATGGTA CGCTAATGAA TGCGCTTTTA
CACCATTGTC CCGATATTGA GCATGTGCCG CGTGCGGGTA TTGTGCACCG TCTCGATAAA
GACACGACAG GTTTGATGGT AGTGGCCAAA ACGGTTGAAG CACAAACCCA TTTAGTGGCT
GCTTTGCAGG CCCGTGAAAT CACTCGTGAA TACGAAGCGA TTGTGATGGG GACTATGACA
GGTGGCGGTA CTGTTGATGA GCCGATTGGC CGTCATCCAA CCAAACGCAC TCATATGGCG
GTGCATCACT CTGGTAAACC AGCCGTTACC CATTATCGGG TTGCCGAAAA GTTCCGTAAT
CACACGCGTT TAAGATTGCG CCTTGAATCG GGTCGTACGC ATCAAATTCG TGTGCACATG
GAATACATTG GCCACGTATT AGTGGGCGAT CCTGTTTATG GTGGTCGTCC GAAACCACCA
AAGGCCGCGA GCCCAGAGTT TTTTGAAATT CTGAAAAACT TTAAACGCCA AGCGCTACAC
GCTGTGCGTC TTGAATTAGC GCACCCAGTG AGCTGTGAAA TCATGAGTTG GCAAGCGCCA
ATTCCTGAAG ACATGGTGAT TTTAACGAAA GCACTGCGTC AAGACACGGT CGAACATCCG
ATCGAGTATT TGTAA
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| Protein sequence | MTQEINLKSE ISATQTGLRL DQALAELFPD YSRTRIKEWI LSDAVYVDGV IVNKPREKVF
ELQQIEIAAT LEEEVHAAAQ AIELNIVYED DHILVINKQA GLVVHPGAGN ADGTLMNALL
HHCPDIEHVP RAGIVHRLDK DTTGLMVVAK TVEAQTHLVA ALQAREITRE YEAIVMGTMT
GGGTVDEPIG RHPTKRTHMA VHHSGKPAVT HYRVAEKFRN HTRLRLRLES GRTHQIRVHM
EYIGHVLVGD PVYGGRPKPP KAASPEFFEI LKNFKRQALH AVRLELAHPV SCEIMSWQAP
IPEDMVILTK ALRQDTVEHP IEYL
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