Gene Sputcn32_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1007 
Symbol 
ID5081809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1122372 
End bp1122908 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content44% 
IMG OID640498132 
Producthypothetical protein 
Protein accessionYP_001182535 
Protein GI146292111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000613639 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATACC GTTACCTTGC CATACTATTG AGTGCTTTAG TGTTATTAAG CGCTTGTAGC 
AGTAAACCGA AAAACGATTA CGATCTCAAT TACGACTTCG CCGCACTACG CAGCTTTACC 
CAGCTCACAC CACAGCCAAC GGACGATCCG CTAAGTGCCC AGCGTATTCA AACAGAAATC 
AATGATCAAT TGACTCAAAA GGGTTTTGTT GAAAATACAA CATCACCCGA TTTTAATGTC 
ACCTACGCCT TACTGACCCA AGATAAGCCC AAAGATTCAG GACTATCCAT TGGATTAGGC 
ACAGGTACAT TCGGAAGTTC GGGCGGGATT GGAATAGGTA CCAGTGTTGG CGTTCCACTG 
GGGAGTGATA CTGCTAAAAT TCAAACCATT CAGATAGATA TTGTGGACCC TAGGACAAAA 
AAGTTGATTT GGCGTGGGAG CGATAGTTTT GATTTTGATA CTGGTGGCGA TAAAAAAGCT 
CAAGATACGG CCAAAGCAGT CAGCCGAATT TTGGCGCAGT TCCCACCCCA AAAATAA
 
Protein sequence
MGYRYLAILL SALVLLSACS SKPKNDYDLN YDFAALRSFT QLTPQPTDDP LSAQRIQTEI 
NDQLTQKGFV ENTTSPDFNV TYALLTQDKP KDSGLSIGLG TGTFGSSGGI GIGTSVGVPL 
GSDTAKIQTI QIDIVDPRTK KLIWRGSDSF DFDTGGDKKA QDTAKAVSRI LAQFPPQK