Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0994 |
Symbol | |
ID | 5081760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1106529 |
End bp | 1107206 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498119 |
Product | nucleotidyl transferase |
Protein accession | YP_001182522 |
Protein GI | 146292098 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.65594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCCA TGATCCTAGC GGCAGGAAGG GGCGAGCGCT TAAGACCATT AACTGACACT GTACCTAAAC CATTAGTGCC AGTATTAGGT AAGCCTCTCA TTGTTTATCA CATTGAAAAA TTGGTCGCGT TGGGGATTAC CGATATAGTG ATTAATCATG CTTGGCTCGG GCATAAATTA GTTGAAGCGC TGGGGGATGG GAGTGCCCTT GGCGCCAATA TCCGTTATAG CGCGGAAGAT AATGCACTTG AAACGGGAGG CGGTATTAAA CGCGCTTTAC CTTTTTTGTG CGAAGACGGA AGTGATGCGC CCTTTTTAGT GATCAACGGT GATGTATTTA TCGATGCTTT ACCGCCTTTA CCAGTGCTTG AGAACGATAT TTTTGCTCAC CTATGGCTAG TCCCCAATCC TGAGCAGCAC CCCCAAGGTG ATTTTGTTTT AAGTGGGAAT AGGGTCAGTG AACAAGGGAG CACAAAGTTC ACTTTTTCTG GCCTAGGTAT TTATCGTCCT AGCTTATTTA ATGGGACCCC AGAAGGGGCC TTTGCTTTAG GACCGTTATT GCGATCACAT ATGGCCCAAG GCCGAGTGAG TGGTGCTATG TTCGAAGGAT TTTGGTGTGA TGTAGGCACT GTGCCGCGTT TACAAGCCCT CGAGTTAACC TTGCTGGATA GCAAGTAA
|
Protein sequence | MKAMILAAGR GERLRPLTDT VPKPLVPVLG KPLIVYHIEK LVALGITDIV INHAWLGHKL VEALGDGSAL GANIRYSAED NALETGGGIK RALPFLCEDG SDAPFLVING DVFIDALPPL PVLENDIFAH LWLVPNPEQH PQGDFVLSGN RVSEQGSTKF TFSGLGIYRP SLFNGTPEGA FALGPLLRSH MAQGRVSGAM FEGFWCDVGT VPRLQALELT LLDSK
|
| |