Gene Sputcn32_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0977 
Symbol 
ID5081790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1089752 
End bp1090417 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID640498102 
Producturacil-DNA glycosylase 
Protein accessionYP_001182505 
Protein GI146292081 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00168707 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTTTT CAACTTGGCA GGATTTTATT GATAACCAGC GTGCACAAAC TTACTACCAA 
GAGTTAATCG CATTTGTGAA CAAAGAACGA CAATTGGGCA AAGTCATTTA TCCTCCTAAA 
GAGGATGTTT TTAACGCTTT CAAGATGACT CCCCTTGAAA ATGTTCGAGT CGTACTCATT 
GGACAAGATC CTTACCATGG CCCAAATCAG GCGCATGGAT TATGCTTCTC CGTTAGGCGT 
GGTATTAAGC CACCACCATC ATTGGCTAAT ATGTATAAAG AACTGGTTAA TGATATTCCT 
GGTTTCCATA TTCCTGACCA TGGTGATTTA AGCTACTGGG CCGAACAAGG GATCTTAATG 
CTCAATACGG TATTAACAGT TGAGCAAGGC CAAGCTCACT CACATGCCAA TGCTGGCTGG 
GAGATATTTA CTACCGCAGT ATTAAAATTG TTAAACGAGC AATCTAGGCC GATTATTTTT 
GTGCTGTGGG GTAGCCATGC AATAAAGAAA GGTGCAGTCA TTACTGCGCC GCAGCATCAA 
GTGTTGTGTG GGCCGCATCC ATCCCCTTTA TCCGCCTATC GTGGATTTTT TGGTTGTGGG 
CATTTTTCAA AGGTGAACCA ATTGCTGACA GCGCGGGGTG AAATCCCTAT ACAGTGGCAA 
GTTTAA
 
Protein sequence
MTFSTWQDFI DNQRAQTYYQ ELIAFVNKER QLGKVIYPPK EDVFNAFKMT PLENVRVVLI 
GQDPYHGPNQ AHGLCFSVRR GIKPPPSLAN MYKELVNDIP GFHIPDHGDL SYWAEQGILM 
LNTVLTVEQG QAHSHANAGW EIFTTAVLKL LNEQSRPIIF VLWGSHAIKK GAVITAPQHQ 
VLCGPHPSPL SAYRGFFGCG HFSKVNQLLT ARGEIPIQWQ V