Gene Sputcn32_0969 details

Gene Information

• Locus tag: Sputcn32_0969
• ID: 5081782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1079902
• End bp: 1081743
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640498094
• Product: lipid ABC transporter ATPase/inner membrane protein
• Protein accession: YP_001182497
• Protein GI: 146292073
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components
• TIGRFAM ID: [TIGR02204] ABC transporter, permease/ATP-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATGAGC CTACTGCTAA ATCATCTGAA TCCATTAAAA CTGACATAGC TAAAAATCCA 
ACCTCAAAGA TACGGCAACG ATCGGTATTA CCTTGGATTG CGGGTTTCCT TAAGCCATAT 
CAGTTTAAAG TGGTCGCCGC GATTATTTTT TTGATGATAG GTTCACTCGC TTGGTTGTCA 
CTCGGCCAAG GAGTGCGCTT GATGGTGGAC GAGGGCTTTG TGCGTGATAA TGCACAGCGA 
TTAAATGAAA TCATACTGTT AGTGCTTGGG ATTACCGCCA TCAGTGGCAC GGCGGTGTTT 
TGTCGTTTTT ATTTAATGAC TTGGCTTGGT GAACGCGTTA GCGCCGATAT TCGCCTTACC 
GTTTATAATC AACTGCTTAA ACTCTCTCCG GCGTTTTACG CTAAGGTGCG AACTGGTGAG 
GTGATCTCCC GTTTTACCGC CGATTCTACC TTGCTTCAAA CTGTCGTAGG TTCAAGCCTT 
TCGATGGCAC TGCGCTCTGG CGTGACAGTC CTTGGTGGTT TAGTGATGAT GGGTATCACT 
AGTGTAAAGA TGACCTTGCT GGTGCTATTG GCTGTGCCTT TAGTGCTAGG GCCAGTGATC 
TTTTTTGGTC GGAAAGTGCG AGTCTTAGCG CGGGAAAGCC AAGACAGGGT TGCCGATCTT 
GGCGCTTATG TTGATGAAAC ACTCCATGAA ATCCACACAG TGCAAGCCTA TGGACATGAG 
GATAAAGATC GCAGTTTATT TCATACCCGC GTTGAAGATG TGATGTCGGC GGCCAGCGGT 
AGAATTCGAT ATCGTGCACT GCTTATTTCA TCCGTGATGT TTTTAAGTAT CGCAGCGATT 
GCTATGGTGA CTTGGGTAGG CGCCCATGAT GTGATGGCCG GTAGGATGAC AGGAGGTGAG 
TTGTCGGCCT TTATGTTTTA CGCAGTGATG GTTGCGGGCG CCGTGGCAAC GATCAGTGAA 
GTGATAGGTG AGATTCAACG GGCATCTGGT GCCGCCGAAC GATTAATTGA ACTGGCTGAA 
ACGCAAGTAG ATATTCCCGT TGCAACTCAT CCAGTGAGTT TACCTGCCGA TGTTAGTGGT 
GAGCTAGTTA TTGAGGGACT CAGTTTTGCT TATCCTGAGC AGGACACCTT AGTGCTTAAA 
GACGTTAATA TGACGATTAC CGCCGGTGAG CGGGTAGCTT TAGTGGGACC GAGTGGCGCG 
GGTAAAAGCA CCTTATTCCA GTTATTACAG CGCTTTTATG TGCCTAGCGC GGGCAGTATT 
CGGCTCGAAG GGATTGATAT TGCGAATCTT TTACCACAGG ATTTGCGTGC ACAGTTTGCA 
TTAGTGCCGC AGGACTCTGT GATCTTTGCC ACTAGCGTGC TTGAAAACGT ACGTTATGGA 
CGAGTCGATG CCACCGAACA AGAAGTGATA GATGCTTGTA TTGCAGCCCG TGCCCATGAG 
TTTATTAGCG AATTTACTGA GGGTTATCAA ACCTATTTAG GCGAGCGTGG AGTGCGACTT 
TCAGGTGGGC AAAAGCAGCG GATCGCTATT GCGCGGGCGA TTCTAGCTGA CAGACCAATA 
TTGTTACTCG ATGAGGCGAC CAGCGCCTTA GATGCCGTCA GTGAGCAGAA AGTAAAGCAA 
GCGCTGGATG TATTGATGGC GAATAAAACC ACCTTGATTA TTGCCCATCG CCTATCGACG 
GTCATCAATG CGGATAGGAT TTTTGTGTTC GATAAGGGCG AGATTGTCGC CAGCGGCCGC 
CATCAAGCCT TGATGCAATC TAATGCGCTA TATCGTGAAT TTGCCAGTTT GCAATTGTTA 
ACCGAAGATG CCAATGCCTG CGCAATCAAT GAGACCACTT AG 

 

Protein sequence

MHEPTAKSSE SIKTDIAKNP TSKIRQRSVL PWIAGFLKPY QFKVVAAIIF LMIGSLAWLS 
LGQGVRLMVD EGFVRDNAQR LNEIILLVLG ITAISGTAVF CRFYLMTWLG ERVSADIRLT 
VYNQLLKLSP AFYAKVRTGE VISRFTADST LLQTVVGSSL SMALRSGVTV LGGLVMMGIT 
SVKMTLLVLL AVPLVLGPVI FFGRKVRVLA RESQDRVADL GAYVDETLHE IHTVQAYGHE 
DKDRSLFHTR VEDVMSAASG RIRYRALLIS SVMFLSIAAI AMVTWVGAHD VMAGRMTGGE 
LSAFMFYAVM VAGAVATISE VIGEIQRASG AAERLIELAE TQVDIPVATH PVSLPADVSG 
ELVIEGLSFA YPEQDTLVLK DVNMTITAGE RVALVGPSGA GKSTLFQLLQ RFYVPSAGSI 
RLEGIDIANL LPQDLRAQFA LVPQDSVIFA TSVLENVRYG RVDATEQEVI DACIAARAHE 
FISEFTEGYQ TYLGERGVRL SGGQKQRIAI ARAILADRPI LLLDEATSAL DAVSEQKVKQ 
ALDVLMANKT TLIIAHRLST VINADRIFVF DKGEIVASGR HQALMQSNAL YREFASLQLL 
TEDANACAIN ETT