Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0965 |
Symbol | |
ID | 5081778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1075344 |
End bp | 1076195 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498090 |
Product | TonB family protein |
Protein accession | YP_001182493 |
Protein GI | 146292069 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTCT TTTTAGGAGG TGAGATTACT GTGACACCAA AACGATATTT GGCCTTTGGC GCGTTAACTA TCGCTATCCA ATCTGGGGTT ATTGCCTCAC AGCCGTCTAT CGTCCCACAG CAATTGAATG TGATATCGAT GACATCTGCC TCCACACTAA ACCGTGGCGC AAATCATGTG AGCCTAAGTT TAGCGATGCC GGTGAAAAAC CTTGCTAACC CTGACATGGC GAAAACTGAC GTGGCAAAAA CTAAGGCTAC TGAACCTATT ATCACGCCAC CCAAAAGCAC GGAATCAAAT ACAGAACAAA CCATCACCGC AAAAGTTGAA AACCACAGCA TTAAATCAAC ATCAGTTGAT ACGCCTATGC TCAAACCTTC TTCAGCTAAA ACGGCAAGCC AAGCTAAAAC CGTTAATCCC CCCACAGAGG GTGAACCGAG GTTAGCCGAT GCCACCTTAT CTCAGCTTTC TGAAATAACA ACAGCAAATC ATATAGAAAA AAAACAAGCC AAGACTGAAA TGGCGGCCGA GTTAACTCAA TCAACTCACC AAACCACCAG CATTAAAACC AATATAGTGG AATTAGAAAA ACCGCTTTTT ACTACGCCAC CACCTCGACC CAATTATCCA CGCATTGCAC GTAAAAAAGG GTTAGAAGGC ACAGCAATGG TAGAAGTCAT GTTTAACGAA TGGGGTGAGC AATTAGCACT TACCCTAGTG AAAAGTTCAG GATTTAGCTT GTTAGACAAG GCCGCACTTG AAGCCGTTGA GACTTGGCAA TTTGAAGCGC CACCCCAAAA ACTGGCAAGT CATTATAAGG TCAGAGTCCC AATCCGTTTT GCACTCAATT AA
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Protein sequence | MYFFLGGEIT VTPKRYLAFG ALTIAIQSGV IASQPSIVPQ QLNVISMTSA STLNRGANHV SLSLAMPVKN LANPDMAKTD VAKTKATEPI ITPPKSTESN TEQTITAKVE NHSIKSTSVD TPMLKPSSAK TASQAKTVNP PTEGEPRLAD ATLSQLSEIT TANHIEKKQA KTEMAAELTQ STHQTTSIKT NIVELEKPLF TTPPPRPNYP RIARKKGLEG TAMVEVMFNE WGEQLALTLV KSSGFSLLDK AALEAVETWQ FEAPPQKLAS HYKVRVPIRF ALN
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